RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HOXC11O43248 304 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 ADH5P11766 374 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 TYRP14679 529 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 HOXD9P28356 352 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 MAPKAPK2P49137 400 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 AMPD2Q01433 879 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF211Q13398 564 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 ITPRIPL2Q3MIP1 535 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 SLC9A4Q6AI14 798 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 SETD3Q86TU7 594 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 RFX6Q8HWS3 928 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 RASGEF1CQ8N431 466 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 PQLC3Q8N755 202 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 FIBINQ8TAL6 211 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 DNASE1L2Q92874 299 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 SLC2A4RGQ9NR83 387 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 TTC7AQ9ULT0 858 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 TBC1D30Q9Y2I9 924 aa12.67□□□□□ -0.38
LINC00339-213ENST00000642137 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
LINC00339-213ENST00000642137 NUP205Q92621 2012 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 OTOL1A6NHN0 477 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 H0Y626 953 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 CEP104O60308 925 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 CST8O60676 142 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 TJP3O95049 919 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 ASGR2P07307 311 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 SRFP11831 508 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 KRT10P13645 584 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 OR1E1P30953 314 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 CXCR5P32302 372 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 GJA4P35212 333 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 IRAK1P51617 712 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 OXCT1P55809 520 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 YBEYP58557 167 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 PFKPQ01813 784 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 TNK2Q07912 1038 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 SLC12A1Q13621 1099 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 C6orf118Q5T5N4 469 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 KAZNQ674X7 775 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 TMCO3Q6UWJ1 677 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 ZNF783Q6ZMS7 281 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 BBS12Q6ZW61 710 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 BZW1Q7L1Q6 419 aaKnown RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 CARNMT1Q8N4J0 409 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 KIF18AQ8NI77 898 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 P2RY11Q96G91 374 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 PSMB7Q99436 277 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 KIAA1522Q9P206 1035 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-213ENST00000642137 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
LINC00339-213ENST00000642137 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 APOL1O14791 398 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 CACNG3O60359 315 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 GLULP15104 373 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 TGM2P21980 687 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 SERPINB6P35237 376 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 EIF2DP41214 584 aaKnown RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 NR2C2P49116 596 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 NDST2P52849 883 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 ADCY2Q08462 1091 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 TUBB2AQ13885 445 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 NCBP2-AS2Q69YL0 99 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 CIR1Q86X95 450 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 SLC13A5Q86YT5 568 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 MFN1Q8IWA4 741 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 PLD5Q8N7P1 536 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 COG1Q8WTW3 980 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 TUBB2BQ9BVA1 445 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 HEMGNQ9BXL5 484 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 KLC2Q9H0B6 622 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 MAGEH1Q9H213 219 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-213ENST00000642137 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 CLEC4EQ9ULY5 219 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 SORCS3Q9UPU3 1222 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
LINC00339-213ENST00000642137 SPTBN5Q9NRC6 3674 aaKnown RBP12.64□□□□□ -0.39
LINC00339-213ENST00000642137 CHD5Q8TDI0 1954 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 APOC4-APOC2K7ER74 178 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 APOC2P02655 101 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms