RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CD27P26842 260 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 GGCXP38435 758 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 CCT8P50990 548 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 PDCLQ13371 301 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 NCEH1Q6PIU2 408 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 AZIN2Q96A70 460 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 ORAI3Q9BRQ5 295 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 SLC4A5Q9BY07 1137 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 TOR4AQ9NXH8 423 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 NCKAP1Q9Y2A7 1128 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 FAM170AA1A519 330 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
PHGDH-213ENST00000641272 GNA14O95837 355 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 TRUB2O95900 331 aaKnown RBP17.27■□□□□ 0.36
PHGDH-213ENST00000641272 VAV1P15498 845 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 RPL34P49207 117 aaKnown RBP17.27■□□□□ 0.36
PHGDH-213ENST00000641272 CENPCQ03188 943 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 PRAMEF14Q5SWL7 426 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 C9orf64Q5T6V5 341 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 RNF219Q5W0B1 726 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-213ENST00000641272 GLRX5Q86SX6 157 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 PROSER1Q86XN7 944 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 STK40Q8N2I9 435 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 MDM1Q8TC05 714 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 OMDQ99983 421 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-213ENST00000641272 POPDC2Q9HBU9 364 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 SLCO3A1Q9UIG8 710 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 LHX6Q9UPM6 363 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 CNTN6Q9UQ52 1028 aa17.27■□□□□ 0.36
PHGDH-213ENST00000641272 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 EDDM13A0A1B0GTR0 161 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 BECN2A8MW95 431 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 F5H5T6 163 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 PLK4O00444 970 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 MED7O43513 233 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 GRAP2O75791 330 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 MOCS3O95396 460 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 CTSKP43235 329 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 IRAK1P51617 712 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 METAP1P53582 386 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 GALCP54803 685 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 MARSP56192 900 aaKnown RBP17.26■□□□□ 0.35
PHGDH-213ENST00000641272 TRIM65Q6PJ69 517 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 FOXR2Q6PJQ5 311 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 USP30Q70CQ3 517 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 ELOA2Q8IYF1 753 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-213ENST00000641272 AADATQ8N5Z0 425 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 ZNF606Q8WXB4 792 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 IGSF8Q969P0 613 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 NEUROG2Q9H2A3 272 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 EBF2Q9HAK2 575 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 AASDHPPTQ9NRN7 309 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-213ENST00000641272 PCDHGB2Q9Y5G2 931 aa17.26■□□□□ 0.35
PHGDH-213ENST00000641272 CACNA1GO43497 2377 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 CABIN1Q9Y6J0 2220 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 IGLV3-25P01717 112 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 WNT1P04628 370 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 PNMA6AP0CW24 399 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 C7P10643 843 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 SLC9A1P19634 815 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 MZF1P28698 734 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 SLC8A1P32418 973 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 C21orf59P57076 290 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 PPP2CBP62714 309 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 YWHAZP63104 245 aaKnown RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 PPP2CAP67775 309 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 ECT2LQ008S8 904 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 C19orf48Q6RUI8 117 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 GATAD2AQ86YP4 633 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 DEFB106AQ8N104 65 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 ATP6V0D2Q8N8Y2 350 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 C1orf131Q8NDD1 294 aaKnown RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 BTN2A3PQ96KV6 586 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 CPXM1Q96SM3 734 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 TRIM62Q9BVG3 475 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 ACE2Q9BYF1 805 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 OSGEPQ9NPF4 335 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 DDIT4Q9NX09 232 aa17.25■□□□□ 0.35
PHGDH-213ENST00000641272 KIAA1522Q9P206 1035 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-213ENST00000641272 A0A1W2PPC4 97 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 FAM149AA5PLN7 773 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 LRRC72A6NJI9 287 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 CBX4O00257 560 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 WNT9AO14904 365 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 IL1BP01584 269 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 CAPNS1P04632 268 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 SRPRAP08240 638 aaKnown RBP17.24■□□□□ 0.35
PHGDH-213ENST00000641272 GRK6P43250 576 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 ADPRHP54922 357 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 KCNJ12Q14500 433 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 CAMK4Q16566 473 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 POM121L1PQ3SYA9 428 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 FAM183BPQ6ZVS7 135 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 TMEM110Q86TL2 294 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms