RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 DONSONQ9NYP3 566 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 HSFX1Q9UBD0 423 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MAGED2Q9UNF1 606 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TBX18O95935 607 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ZDHHC11BP0C7U3 371 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ITGB8P26012 769 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 KPNA1P52294 538 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MTA1Q13330 715 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 ADGRD1Q6QNK2 874 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MIB1Q86YT6 1006 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 AGGF1Q8N302 714 aaeCLIP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 BTN2A3PQ96KV6 586 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 SIGLEC10Q96LC7 697 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 CDK5RAP1Q96SZ6 601 aaKnown RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 EBNA1BP2Q99848 306 aaKnown RBP17.73■□□□□ 0.43
PHGDH-208ENST00000641023 CLSTN3Q9BQT9 956 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 MAD1L1Q9Y6D9 718 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 IKBKGQ9Y6K9 419 aa17.73■□□□□ 0.43
PHGDH-208ENST00000641023 TMEM120BA0PK00 339 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 F5H423 210 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-208ENST00000641023 DFFAO00273 331 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 TRDMT1O14717 391 aaKnown RBP17.72■□□□□ 0.43
PHGDH-208ENST00000641023 LAG3P18627 525 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 CCNCP24863 283 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 GRIA1P42261 906 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 DEFB103AP81534 67 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 DSG1Q02413 1049 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 PIK3R6Q5UE93 754 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 TPGS2Q68CL5 300 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 TRABD2AQ86V40 505 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 ATPAF2Q8N5M1 289 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 RTL3Q8N8U3 475 aaKnown RBP17.72■□□□□ 0.43
PHGDH-208ENST00000641023 CFAP36Q96G28 342 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 TSGA13Q96PP4 275 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 RC3H2Q9HBD1 1191 aaKnown RBP17.72■□□□□ 0.43
PHGDH-208ENST00000641023 FNIP2Q9P278 1114 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 RSPH14Q9UHP6 348 aa17.72■□□□□ 0.43
PHGDH-208ENST00000641023 TRIM43BA6NCK2 446 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 NDUFAB1O14561 156 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 KIAA0355O15063 1070 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 TLR5O60602 858 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 TMCO2Q7Z6W1 182 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 LRRC49Q8IUZ0 686 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 CMTR2Q8IYT2 770 aaKnown RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 PDZD8Q8NEN9 1154 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 DEPDC1BQ8WUY9 529 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 TRIM43Q96BQ3 446 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 AGAP3Q96P47 875 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 DHRS4Q9BTZ2 278 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 SLC12A8A0AV02 714 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 SDR42E2A6NKP2 422 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 WASH4PA8MWX3 477 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 ZBTB24O43167 697 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-208ENST00000641023 ABLIM3O94929 683 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 CREB1P16220 341 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 SEC24CP53992 1094 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 RING1Q06587 406 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 MS4A13Q5J8X5 152 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 TEKT5Q96M29 485 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 VANGL2Q9ULK5 521 aa17.71■□□□□ 0.43
PHGDH-208ENST00000641023 FOXO6A8MYZ6 492 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ZBTB17Q13105 803 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 EFTUD2Q15029 972 aaKnown RBP eCLIP17.7■□□□□ 0.423e-6■■■■□ 23.9
PHGDH-208ENST00000641023 NUGGCQ68CJ6 796 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 C14orf80Q86SX3 495 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 NLRP14Q86W24 1093 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ARHGAP12Q8IWW6 846 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF276Q8N554 614 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 SMC6Q96SB8 1091 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ZYG11BQ9C0D3 744 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 GBA3Q9H227 469 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 RABEP2Q9H5N1 569 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 CCSER2Q9H7U1 834 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 SPG21Q9NZD8 308 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 MPP6Q9NZW5 540 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 PPARGC1AQ9UBK2 798 aaKnown RBP17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ARHGAP42A6NI28 874 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 BAIAP3O94812 1187 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 JCHAINP01591 159 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 INHBAP08476 426 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 TIGD7Q6NT04 549 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-208ENST00000641023 UNC5AQ6ZN44 842 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 GSDMBQ8TAX9 411 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
PHGDH-208ENST00000641023 DPF3Q92784 378 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF512Q96ME7 567 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-208ENST00000641023 YME1L1Q96TA2 773 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 HERC2P3Q9BVR0 1158 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 TMEM106CQ9BVX2 250 aa17.7■□□□□ 0.42
PHGDH-208ENST00000641023 SLC39A8Q9C0K1 460 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms