RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
SPIN3-243ENST00000640717 RTP4Q96DX8 246 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 VPS11Q9H270 941 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
SPIN3-243ENST00000640717 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 KLHL14Q9P2G3 628 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 DNAJC6O75061 913 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 CNTN5O94779 1100 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 CYP2C18P33260 490 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 KCNJ2P63252 427 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 RTP2Q5QGT7 225 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 COLGALT2Q8IYK4 626 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 SPATA6LQ8N4H0 392 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 SLC25A41Q8N5S1 370 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 GSDMBQ8TAX9 411 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
SPIN3-243ENST00000640717 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
SPIN3-243ENST00000640717 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 KCNA4P22459 653 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TARSP26639 723 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SEMA5AQ13591 1074 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 RASSF3Q86WH2 238 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TDRPQ86YL5 185 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 OXNAD1Q96HP4 312 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 MLPHQ9BV36 600 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 BRD8Q9H0E9 1235 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 RGS18Q9NS28 235 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 M0QZQ0 153 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 BUD23O43709 281 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 KRT37O76014 449 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CBX6O95503 412 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 DNAJB2P25686 324 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 HOXD10P28358 340 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 AVPR1AP37288 418 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CXCR3P49682 368 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ACTN3Q08043 901 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 XRCC4Q13426 336 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CRYMQ14894 314 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 GPNMBQ14956 572 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 C10orf120Q5SQS8 335 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 RNF135Q8IUD6 432 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ZFATQ9P243 1243 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TXNDC16Q9P2K2 825 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 A8MUI8 341 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 C1QAP02745 245 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SNRPAP09012 282 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SLC11A1P49279 550 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TAF10Q12962 218 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 NR1H3Q13133 447 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SEPT6Q14141 434 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 RAP1GAP2Q684P5 730 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 NCAPGQ9BPX3 1015 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ECT2Q9H8V3 914 aa13.05□□□□□ -0.32
SPIN3-243ENST00000640717 FBXO6Q9NRD1 293 aaPredicted RBP13.05□□□□□ -0.32
SPIN3-243ENST00000640717 ENPP3O14638 875 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 TPP1O14773 563 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 IRAK2O43187 625 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 SLC4A1P02730 911 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 SCNN1AP37088 669 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 RPL10AP62906 217 aaKnown RBP13.04□□□□□ -0.32
SPIN3-243ENST00000640717 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
SPIN3-243ENST00000640717 PDK4Q16654 411 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 ALFQ53S48 1182 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 TTC39BQ5VTQ0 682 aaPredicted RBP13.04□□□□□ -0.32
SPIN3-243ENST00000640717 ANKLE1Q8NAG6 615 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 MYEOVQ96EZ4 313 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPIN3-243ENST00000640717 OPHN1O60890 802 aa13.04□□□□□ -0.32
SPIN3-243ENST00000640717 TMPRSS15P98073 1019 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms