RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 C6orf106Q9H6K1 298 aaPredicted RBP18.51■□□□□ 0.55
PNKP-225ENST00000636214 SIX2Q9NPC8 291 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 RRN3Q9NYV6 651 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 INTS6Q9UL03 887 aaKnown RBP18.51■□□□□ 0.55
PNKP-225ENST00000636214 STAP1Q9ULZ2 295 aa18.51■□□□□ 0.55
PNKP-225ENST00000636214 CABIN1Q9Y6J0 2220 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 TARSL2A2RTX5 802 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 SIN3BO75182 1162 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 EEF1GP26641 437 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 CLCN1P35523 988 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 MATKP42679 507 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 AFF3P51826 1226 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 PITX1P78337 314 aaPredicted RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 DRAP1Q14919 205 aaPredicted RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 FSCBQ5H9T9 825 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 OLFML1Q6UWY5 402 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 USP30Q70CQ3 517 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 SLC26A9Q7LBE3 791 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 ADAT2Q7Z6V5 191 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 FAM71AQ8IYT1 594 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 CCAR2Q8N163 923 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 WDTC1Q8N5D0 677 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 LMLNQ96KR4 655 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 OMDQ99983 421 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 RSPH9Q9H1X1 276 aaPredicted RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 PABPC3Q9H361 631 aaKnown RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 FBXL12Q9NXK8 326 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 SLC25A13Q9UJS0 675 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 AJAP1Q9UKB5 411 aaPredicted RBP18.5■□□□□ 0.55
PNKP-225ENST00000636214 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
PNKP-225ENST00000636214 SPAARA0A1B0GVQ0 90 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 FAM47DPA6NHR8 397 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 M0QYT0 321 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 ERBB2P04626 1255 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 PNMA6AP0CW24 399 aaPredicted RBP18.49■□□□□ 0.55
PNKP-225ENST00000636214 PDGFRAP16234 1089 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 NOS2P35228 1153 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 RNASE9P60153 205 aaKnown RBP18.49■□□□□ 0.55
PNKP-225ENST00000636214 PTPN20Q4JDL3 420 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 MIIPQ5JXC2 388 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 MTG2Q9H4K7 406 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 GAREM1Q9H706 876 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 PLCB1Q9NQ66 1216 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.49■□□□□ 0.55
PNKP-225ENST00000636214 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
PNKP-225ENST00000636214 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 LRRC72A6NJI9 287 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 TTC34A8MYJ7 566 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 RNASEH2AO75792 299 aaKnown RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 TRIM16O95361 564 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 CD59P13987 128 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 CTSOP43234 321 aaPredicted RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 PSMD8P48556 350 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 ZNF177Q13360 481 aaPredicted RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 ARID5BQ14865 1188 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 CST6Q15828 149 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 TCP11X2Q5H9J9 407 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 KLHDC7AQ5VTJ3 777 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 FBXL22Q6P050 247 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 CIR1Q86X95 450 aaPredicted RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 MMAAQ8IVH4 418 aaKnown RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 NAXDQ8IW45 347 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 APCDD1Q8J025 514 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 ZNF397Q8NF99 534 aaPredicted RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 MYO19Q96H55 970 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 RPL10LQ96L21 214 aaKnown RBP18.48■□□□□ 0.55
PNKP-225ENST00000636214 MRGPRX3Q96LB0 322 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 TMEM51Q9NW97 253 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.48■□□□□ 0.55
PNKP-225ENST00000636214 VANGL2Q9ULK5 521 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 ITIH6Q6UXX5 1313 aa18.48■□□□□ 0.55
PNKP-225ENST00000636214 A0A1B0GVT2 93 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 A0A1W2PP55 124 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 GOLGA6L22H0YM25 854 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 MID1O15344 667 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 SH3BP5O60239 455 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 ADH1BP00325 375 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 UCHL3P15374 230 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 CYP11B1P15538 503 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 CD27P26842 260 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 CSNK1EP49674 416 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 SULT1E1P49888 294 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 AUHQ13825 339 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 ELAVL3Q14576 367 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 SUZ12Q15022 739 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 ZNF423Q2M1K9 1284 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 FKBP15Q5T1M5 1219 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 TAF3Q5VWG9 929 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 DSG4Q86SJ6 1040 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 SETD7Q8WTS6 366 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 SKA1Q96BD8 255 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 C18orf8Q96DM3 657 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 PRMT1Q99873 361 aaKnown RBP18.47■□□□□ 0.55
PNKP-225ENST00000636214 SCNM1Q9BWG6 230 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 ADAM33Q9BZ11 813 aa18.47■□□□□ 0.55
PNKP-225ENST00000636214 SIK2Q9H0K1 926 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms