RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 CHSY1Q86X52 802 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 CIR1Q86X95 450 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 TMC8Q8IU68 726 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 RELL1Q8IUW5 271 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 CCDC13Q8IYE1 715 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 ZNF567Q8N184 647 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 RTL3Q8N8U3 475 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 DPF3Q92784 378 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 WBP2Q969T9 261 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 SLC39A8Q9C0K1 460 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 RNF38Q9H0F5 515 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 TSPYL1Q9H0U9 437 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 TLR9Q9NR96 1032 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 IRAK3Q9Y616 596 aa10.26□□□□□ -0.77
CACNA1A-216ENST00000635742 IGLV3-10A0A075B6K4 115 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 WASH4PA8MWX3 477 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 DFFAO00273 331 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 GRM6O15303 877 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 NCAM2O15394 837 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 RRP9O43818 475 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TTC4O95801 387 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 F11P03951 625 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MX2P20592 715 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MAGEA4P43358 317 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MAGEA6P43360 314 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 PDIA2Q13087 525 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 CAMK1Q14012 370 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 AFMIDQ63HM1 303 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TFAP2DQ7Z6R9 452 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ITIH5Q86UX2 942 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 KREMEN2Q8NCW0 462 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SLC22A17Q8WUG5 538 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SLC22A12Q96S37 553 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 EMILIN2Q9BXX0 1053 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 NOL6Q9H6R4 1146 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 GKN1Q9NS71 199 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 PPARGC1AQ9UBK2 798 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 UXTQ9UBK9 157 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SLC12A6Q9UHW9 1150 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 RWDD3Q9Y3V2 267 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MTCL1Q9Y4B5 1905 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MYO18AQ92614 2054 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 C5orf67F2Z3F1 127 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SMAPO00193 183 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 OPA1O60313 960 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 OPHN1O60890 802 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 STC2O76061 302 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 GLUD1P00367 558 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 LRG1P02750 347 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 CA3P07451 260 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 APRTP07741 180 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 IRF1P10914 325 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 RHOQP17081 205 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TACR2P21452 398 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 PSMB4P28070 264 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SLC6A4P31645 630 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ARL4CP56559 192 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 CYP4F8P98187 520 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SEMA5AQ13591 1074 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 FAM133BQ5BKY9 247 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 C4orf22Q6V702 233 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 CENPUQ71F23 418 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ZNF534Q76KX8 674 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ANKMY2Q8IV38 441 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ZBED8Q8IZ13 594 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ATPAF2Q8N5M1 289 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 LZTR1Q8N653 840 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 MRPL43Q8N983 215 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 PLD4Q96BZ4 506 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 GORASP1Q9BQQ3 440 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ZYG11BQ9C0D3 744 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 BRD8Q9H0E9 1235 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TRPC7Q9HCX4 862 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 TMEM248Q9NWD8 314 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 SMPD4Q9NXE4 827 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 ZNF212Q9UDV6 495 aa10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-216ENST00000635742 DRGXA6NNA5 263 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 E7ESA3 106 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 ACSL4O60488 711 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 STK10O94804 968 aaKnown RBP10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 KLKB1P03952 638 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 MBL2P11226 248 aaPredicted RBP10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 TPSB2P20231 275 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 GABRR2P28476 465 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 CORO1AP31146 461 aaKnown RBP10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 MAGEA10P43363 369 aaPredicted RBP10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 PPP3CCP48454 512 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 CLCN4P51793 760 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 GYS2P54840 703 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 IFFO1Q0D2I5 559 aa10.24□□□□□ -0.77
CACNA1A-216ENST00000635742 SHHQ15465 462 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms