RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DDHD1Q8NEL9 900 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 NDUFA13Q9P0J0 144 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 XYLBO75191 536 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 KDELR1P24390 212 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 IRX1P78414 480 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 IL5RAQ01344 420 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 PRMT9Q6P2P2 845 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 HIC2Q96JB3 615 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 FAM220BPB1ANY3 271 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 MAPK9P45984 424 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 ARMC12Q5T9G4 340 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 PANX3Q96QZ0 392 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 POMKQ9H5K3 350 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 CCDC154A6NI56 674 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 MEI4A8MW99 385 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 A8MX80 341 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 VGLL4Q14135 290 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 ZCCHC8Q6NZY4 707 aaKnown RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 DHFR2Q86XF0 187 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 USP6NLQ92738 828 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
SCN8A-209ENST00000627620 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-209ENST00000627620 TMED10P49755 219 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 TCHHL1Q5QJ38 904 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 TMEM26Q6ZUK4 368 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 POLR1EQ9GZS1 481 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 GDF3Q9NR23 364 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 MARCH2Q9P0N8 246 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 TYMPP19971 482 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 SCNN1GP51170 649 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 NAB1Q13506 487 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CDK20Q8IZL9 346 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 DPP10Q8N608 796 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 WNT8BQ93098 351 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 LENG9Q96B70 501 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ARMC7Q9H6L4 198 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 EPS8L2Q9H6S3 715 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CRYL1Q9Y2S2 319 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ZNF135P52742 658 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 FAM45BPQ6NSW5 357 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 DOK6Q6PKX4 331 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ZCCHC23Q6ZST2 131 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CACUL1Q86Y37 369 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 KAT5Q92993 513 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 SYBUQ9NX95 663 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 MRASO14807 208 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 INPP4BO15327 924 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 WBP4O75554 376 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CLTBP09497 229 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 NOS2P35228 1153 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 PLK1P53350 603 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 PPIL2Q13356 520 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 MEA1Q16626 185 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 DSG4Q86SJ6 1040 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 BCL9O00512 1426 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CLPTM1O96005 669 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 GRK4P32298 578 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CDK7P50613 346 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ATAD3BQ5T9A4 648 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 VSIG10LQ86VR7 867 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 RIOX2Q8IUF8 465 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 REPS1Q96D71 796 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 MRPL48Q96GC5 212 aaKnown RBP13.04□□□□□ -0.32
SCN8A-209ENST00000627620 ETNK2Q9NVF9 386 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 OR12D3Q9UGF7 316 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
SCN8A-209ENST00000627620 PSMD10O75832 226 aa13.03□□□□□ -0.32
SCN8A-209ENST00000627620 GLRA2P23416 452 aa13.03□□□□□ -0.32
SCN8A-209ENST00000627620 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
SCN8A-209ENST00000627620 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
SCN8A-209ENST00000627620 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms