RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 JOSD2Q8TAC2 188 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 FAM172AQ8WUF8 416 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CTNNBL1Q8WYA6 563 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ZNF592Q92610 1267 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CLDN23Q96B33 292 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 VCPIP1Q96JH7 1222 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 CCDC42Q96M95 316 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TKTL2Q9H0I9 626 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 PIGVQ9NUD9 493 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 TAS2R14Q9NYV8 317 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 MARK1Q9P0L2 795 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 VANGL2Q9ULK5 521 aa7.47□□□□□ -1.21
NPLOC4-221ENST00000625705 A0A087X0T9 212 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 C2CD4BA6NLJ0 364 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SIGLEC16A6NMB1 481 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 H0Y858 1186 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PAGE1O75459 146 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 MOCS3O95396 460 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 KLF8O95600 359 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PENKP01210 267 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 IGLV3-25P01717 112 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 FAM228BP0C875 321 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 TFE3P19532 575 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 HOXD9P28356 352 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SLC6A4P31645 630 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 RFC1P35251 1148 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PTPN9P43378 593 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 TNFRSF4P43489 277 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 GSCP56915 257 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 RPS24P62847 133 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 MRPS21P82921 87 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PTP4A2Q12974 167 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 CLN3Q13286 438 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 CCINQ13939 588 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 DBN1Q16643 649 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 FAM133BQ5BKY9 247 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 MS4A13Q5J8X5 152 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 EFHC2Q5JST6 749 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 EOGTQ5NDL2 527 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ZFYVE27Q5T4F4 411 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PIK3R6Q5UE93 754 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 FYB2Q5VWT5 728 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 RNF219Q5W0B1 726 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 HEATR6Q6AI08 1181 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 NADSYN1Q6IA69 706 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ALKBH5Q6P6C2 394 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ZC3H14Q6PJT7 736 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ARCQ7LC44 396 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 DNAAF5Q86Y56 855 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ETFBKMTQ8IXQ9 262 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 CHPFQ8IZ52 775 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PGBD3Q8N328 593 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SPEM1Q8N4L4 309 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ALLCQ8N6M5 410 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SPC24Q8NBT2 197 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 WFIKKN2Q8TEU8 576 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ATOH1Q92858 354 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 AZIN2Q96A70 460 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SLC39A13Q96H72 371 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 MRFAP1L1Q96HT8 127 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 PRICKLE1Q96MT3 831 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 CNPY3Q9BT09 278 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 SLC2A11Q9BYW1 496 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 KCNH6Q9H252 994 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 FBRSL1Q9HCM7 1045 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ABCB8Q9NUT2 735 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 BCCIPQ9P287 314 aaKnown RBP eCLIP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ARHGAP20Q9P2F6 1191 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 XPO7Q9UIA9 1087 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 GGA2Q9UJY4 613 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.22
NPLOC4-221ENST00000625705 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 A0A1B0GVM2 712 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 SSU72P8A0A1W2PR75 194 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 TCAF2A6NFQ2 919 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 SHISA7A6NL88 538 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 TRIM24O15164 1050 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 CCP110O43303 1012 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 PRPSAP2O60256 369 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 SRGAP2O75044 1071 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 ALDH1A2O94788 518 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 LUC7L3O95232 432 aaKnown RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 ADCY5O95622 1261 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 ATP5BP06576 529 aaKnown RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 PABPC1P11940 636 aaKnown RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 HOXB2P14652 356 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 POLR2EP19388 210 aaKnown RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 CYLC1P35663 651 aaPredicted RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 WASP42768 502 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 CXCR3P49682 368 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 SGSHP51688 502 aa7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 ZNF143P52747 638 aaPredicted RBP7.45□□□□□ -1.22
NPLOC4-221ENST00000625705 ATXN1P54253 815 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms