RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SH3PXD2BA1X283 911 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 C7orf72A4D263 438 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 STX16-NPEPL1H3BU86 382 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 BOLA2-SMG1P6H3BVE0 249 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 NEMP1O14524 444 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 WDR46O15213 610 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 AMHP03971 560 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 SUPT20HL2P0C7V6 817 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 ENO3P13929 434 aaPredicted RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 GPD2P43304 727 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CD97P48960 835 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 MGAT5BQ3V5L5 792 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 SUPT20HL1Q3ZLR7 823 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CCDC153Q494R4 210 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 PGAM4Q8N0Y7 254 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 GRIN3AQ8TCU5 1115 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 EME1Q96AY2 570 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 ACO2Q99798 780 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 WDR41Q9HAD4 459 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 PLGRKTQ9HBL7 147 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 SNX15Q9NRS6 342 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 RRN3Q9NYV6 651 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 ZNF70Q9UC06 446 aaPredicted RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 TMEM221A6NGB7 291 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ACOT8O14734 319 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 H6PDO95479 791 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 HOXC6P09630 235 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 NELFEP18615 380 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 TXNL4AP83876 142 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 GBE1Q04446 702 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 CCDC14Q49A88 953 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 BOLA3Q53S33 107 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ZPBP2Q6X784 338 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 RNF168Q8IYW5 571 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 PLD6Q8N2A8 252 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ZNF526Q8TF50 670 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 ELOVL4Q9GZR5 314 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ZNHIT2Q9UHR6 403 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ZNF711Q9Y462 761 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 COL4A5P29400 1685 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ARHGEF37A1IGU5 675 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 TMEM114B3SHH9 223 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 OATP04181 439 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 ENTPD1P49961 510 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 SESN2P58004 480 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 NAB1Q13506 487 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 LSM12Q3MHD2 195 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 SLC44A4Q53GD3 710 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 OR6B2Q6IFH4 312 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 RSBN1LQ6PCB5 846 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 FAM183BPQ6ZVS7 135 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 PATL1Q86TB9 770 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 ADAM32Q8TC27 787 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 SNRNP25Q9BV90 132 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
LDB3-209ENST00000623056 NGRNQ9NPE2 291 aaKnown RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 CTDP1Q9Y5B0 961 aaPredicted RBP14.43□□□□□ -0.1
LDB3-209ENST00000623056 G3V2L1 256 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 OGTO15294 1046 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ASNSP08243 561 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 KRT19P08727 400 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 PGAM1P18669 254 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 MPSTP25325 297 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 MGAT1P26572 445 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 IL23RQ5VWK5 629 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 CARM1Q86X55 608 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ARNTL2Q8WYA1 636 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ZNF597Q96LX8 424 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 BCO2Q9BYV7 579 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 NUF2Q9BZD4 464 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 OSBPL6Q9BZF3 934 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 CAAP1Q9H8G2 361 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 COQ10BQ9H8M1 238 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 TXNDC16Q9P2K2 825 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 CPSF3Q9UKF6 684 aaKnown RBP14.42□□□□□ -0.1
LDB3-209ENST00000623056 NR2E3Q9Y5X4 410 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 SQORQ9Y6N5 450 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 H3BNH8 94 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 TNNC2P02585 160 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ERVK-10P10266 1014 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 CYP2F1P24903 491 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 PPARGP37231 505 aaPredicted RBP14.42□□□□□ -0.1
LDB3-209ENST00000623056 NDST2P52849 883 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ZNF667Q5HYK9 610 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 DPH6Q7L8W6 267 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 SETD3Q86TU7 594 aaPredicted RBP14.42□□□□□ -0.1
LDB3-209ENST00000623056 TMEM130Q8N3G9 435 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 FAM156AQ8NDB6 213 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ZSCAN18Q8TBC5 510 aaPredicted RBP14.42□□□□□ -0.1
LDB3-209ENST00000623056 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 ZNF670Q9BS34 389 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 VPS33BQ9H267 617 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 SEMA6AQ9H2E6 1030 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 PRDM16Q9HAZ2 1276 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 PAIP2BQ9ULR5 123 aaKnown RBP14.42□□□□□ -0.1
LDB3-209ENST00000623056 MYRFQ9Y2G1 1151 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms