RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PEX1O43933 1283 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 CHN2P52757 468 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 NIPAL4Q0D2K0 466 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 TDRD5Q8NAT2 981 aaKnown RBP16.15■□□□□ 0.18
NPHP4-211ENST00000622020 ZSCAN18Q8TBC5 510 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-211ENST00000622020 DNAJB4Q9UDY4 337 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 XRCC1P18887 633 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-211ENST00000622020 TPSB2P20231 275 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 DEUP1Q05D60 604 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 SEMA5AQ13591 1074 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 TPSAB1Q15661 275 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 C6orf52Q5T4I8 152 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 RAB3IL1Q8TBN0 382 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 NLRP7Q8WX94 980 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 DCUN1D1Q96GG9 259 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 CATSPER2Q96P56 530 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 PDZD7Q9H5P4 517 aa16.15■□□□□ 0.18
NPHP4-211ENST00000622020 A0A096LPK6 155 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 A0A0A0MRY4 1105 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 A0A1B0GTW7 788 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 TK2O00142 265 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ARSAP15289 507 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 THOP1P52888 689 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ANKRD20A4Q4UJ75 823 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 FSTL4Q6MZW2 842 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 C18orf25Q96B23 403 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 SPATA13Q96N96 652 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 PRPF18Q99633 342 aaKnown RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 JUNP05412 331 aaKnown RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 INSRRP14616 1297 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 MX2P20592 715 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 LMO2P25791 158 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ARL4AP40617 200 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 MAGEA6P43360 314 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 RBP5P82980 135 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 DYNC1I2Q13409 638 aaKnown RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 HNRNPDQ14103 355 aaKnown RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 LRRC23Q53EV4 343 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ZNF618Q5T7W0 954 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 TIFABQ6ZNK6 161 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 ARHGAP18Q8N392 663 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 SNX31Q8N9S9 440 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 TMA16Q96EY4 203 aaKnown RBP16.14■□□□□ 0.17
NPHP4-211ENST00000622020 CERS2Q96G23 380 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 HIC2Q96JB3 615 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 FAM167AQ96KS9 214 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 QKIQ96PU8 341 aaKnown RBP eCLIP16.14■□□□□ 0.176e-11■■■■□ 19.4
NPHP4-211ENST00000622020 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 TCF7L2Q9NQB0 619 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 SORCS3Q9UPU3 1222 aa16.14■□□□□ 0.17
NPHP4-211ENST00000622020 MDM4O15151 490 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 PHGDHO43175 533 aaKnown RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 DESP17661 470 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 FDFT1P37268 417 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 FLOT2Q14254 428 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 DCAF6Q58WW2 860 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 UGT2A3Q6UWM9 527 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 KBTBD6Q86V97 674 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 SLC35F5Q8WV83 523 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 RCN3Q96D15 328 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 LRGUKQ96M69 825 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 OLFM3Q96PB7 478 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 SEMA6AQ9H2E6 1030 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 CYP3A43Q9HB55 503 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 SLC39A10Q9ULF5 831 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 LZTS1Q9Y250 596 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 GRK2P25098 689 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 MS4A2Q01362 244 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 TTLL12Q14166 644 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 PDK1Q15118 436 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 CERCAMQ5T4B2 595 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 ZNF567Q8N184 647 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 SGF29Q96ES7 293 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 CDH19Q9H159 772 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 DNAJC28Q9NX36 388 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 KLHL8Q9P2G9 620 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 TUBGCP4Q9UGJ1 667 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 IGKV6-21A0A0C4DH24 114 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 C19orf81C9J6K1 198 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 HNRNPRO43390 633 aaKnown RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 CLPTM1O96005 669 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 POLBP06746 335 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 PGAM1P18669 254 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 INHBCP55103 352 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 MTTPP55157 894 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 IFRD2Q12894 506 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-211ENST00000622020 DPYSL2Q16555 572 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 NRF1Q16656 503 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 PQLC1Q8N2U9 271 aa16.13■□□□□ 0.17
NPHP4-211ENST00000622020 GP5P40197 560 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 ZNF460Q14592 562 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 CYTH1Q15438 398 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 IL31Q6EBC2 164 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms