RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 E7ESA3 106 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 ZBTB24O43167 697 aaPredicted RBP10.19□□□□□ -0.78
VTA1-205ENST00000620996 TCEA3O75764 348 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 FAM107AO95990 144 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 NEFHP12036 1026 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 PTPN3P26045 913 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 WASHC5Q12768 1159 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 QPCTQ16769 361 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 EMC10Q5UCC4 262 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 ARHGAP36Q6ZRI8 547 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 KDELC2Q7Z4H8 507 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 AGGF1Q8N302 714 aaeCLIP10.19□□□□□ -0.78
VTA1-205ENST00000620996 PRDM16Q9HAZ2 1276 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 SAMD15Q9P1V8 674 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 TSC2P49815 1807 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 ADAM12O43184 909 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 MT-ND3P03897 115 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 GLUD2P49448 558 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ANKS3Q6ZW76 656 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 C14orf80Q86SX3 495 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 TRABD2AQ86V40 505 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 LRRC34Q8IZ02 419 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 FBXO22Q8NEZ5 403 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ATXN2LQ8WWM7 1075 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 ITFG2Q969R8 447 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 STAMBPL1Q96FJ0 436 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 C8orf48Q96LL4 319 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ZNF512Q96ME7 567 aaPredicted RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 CATSPERBQ9H7T0 1116 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 XAB2Q9HCS7 855 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 IL1RAPL1Q9NZN1 696 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SCML2Q9UQR0 700 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 RPS6KL1Q9Y6S9 549 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 MYO18AQ92614 2054 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 FAM47DPA6NHR8 397 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ARHGAP42A6NI28 874 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 KIAA0754O94854 1291 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 NFKB1P19838 968 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 FGFR3P22607 806 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 GARSP41250 739 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 ITKQ08881 620 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ZBTB17Q13105 803 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 NR1H3Q13133 447 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SEMA3BQ13214 749 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SEMA5AQ13591 1074 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 BMPR2Q13873 1038 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 MPP2Q14168 576 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 BRMS1LQ5PSV4 323 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 HHATQ5VTY9 493 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ARHGAP18Q8N392 663 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 OR52K1Q8NGK4 314 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 MAML1Q92585 1016 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SEZ6LQ9BYH1 1024 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 FRMD8Q9BZ67 464 aaPredicted RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 TLR8Q9NR97 1041 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 MARCH2Q9P0N8 246 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 HS3ST4Q9Y661 456 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SCN5AQ14524 2016 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 E9PAM4 449 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 HGSO14964 777 aaPredicted RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 ATP9BO43861 1147 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ACRP10323 421 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 TPSB2P20231 275 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 E2F5Q15329 346 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 PARP6Q2NL67 630 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 RAP1GAP2Q684P5 730 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 NUGGCQ68CJ6 796 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 TRMT10BQ6PF06 316 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 UNC5AQ6ZN44 842 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 OTUD6BQ8N6M0 293 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ELAC2Q9BQ52 826 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 C12orf65Q9H3J6 166 aaKnown RBP10.18□□□□□ -0.78
VTA1-205ENST00000620996 CCSER2Q9H7U1 834 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 ETAA1Q9NY74 926 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 FRMPD3Q5JV73 1810 aa10.18□□□□□ -0.78
VTA1-205ENST00000620996 IQANK1A0A1B0GTG1 560 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 NCAM2O15394 837 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 COG7P83436 770 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 IFT88Q13099 833 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 GPR17Q13304 367 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 USP41Q3LFD5 358 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 GKAP1Q5VSY0 366 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 FAM47EQ6ZV65 393 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CIR1Q86X95 450 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 UNC5BQ8IZJ1 945 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 AUTS2Q8WXX7 1259 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 TMEM169Q96HH4 297 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 PAWRQ96IZ0 340 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 TGS1Q96RS0 853 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 EBNA1BP2Q99848 306 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 ALG13Q9NP73 1137 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 NDFIP2Q9NV92 336 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 SLC17A6Q9P2U8 582 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CXorf49A8MYA2 514 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms