RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 INPP5DQ92835 1189 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 VMP1Q96GC9 406 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 FOPNLQ96NB1 174 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 MIR1-1HGQ9H1L0 117 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 MFSD1Q9H3U5 465 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 DHX33Q9H6R0 707 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 EURLQ9NYK6 297 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 RABGEF1Q9UJ41 708 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF214Q9UL59 606 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CLUHO75153 1309 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 C2orf71A6NGG8 1288 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM49D1C9J1S8 452 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ACKR2O00590 384 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 AIM2O14862 343 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 LRCH4O75427 683 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 LSM8O95777 96 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ENO1P06733 434 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 NFICP08651 508 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ELK3P41970 407 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 GHRHRQ02643 423 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 MOGSQ13724 837 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 MAPRE1Q15691 268 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 NPNTQ6UXI9 565 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 DEFB106AQ8N104 65 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 OR6K2Q8NGY2 324 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 C10orf82Q8WW14 230 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 NKD2Q969F2 451 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ULBP1Q9BZM6 244 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TSPYL2Q9H2G4 693 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 LRMDAQ9H2I8 198 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 PKD2L2Q9NZM6 624 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 WARS2Q9UGM6 360 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ST3GAL5Q9UNP4 418 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 SNCAIPQ9Y6H5 919 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 E5RJQ4 531 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 AVILO75366 819 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 GUCA1CO95843 209 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ACRP10323 421 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ALADP13716 330 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 KDELR1P24390 212 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CCR1P32246 355 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 OAZ1P54368 228 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 RPL10AP62906 217 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TAP1Q03518 808 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CCDC15Q0P6D6 951 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 CUL3Q13618 768 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 STARD3Q14849 445 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 LRRC8EQ6NSJ5 796 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 TDRPQ86YL5 185 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 ATP6V0D2Q8N8Y2 350 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 RNPEPL1Q9HAU8 725 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 FBXO6Q9NRD1 293 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 USP18Q9UMW8 372 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 DNAJC16Q9Y2G8 782 aa8.47□□□□□ -1.05
PTPDC1-204ENST00000620992 FAM95CA0A1B0GW59 222 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 SCAMP1O15126 338 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 MGEA5O60502 916 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM63AO94886 807 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 VDRP11473 427 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 CKBP12277 381 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 ARL2P36404 184 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 TUBP50607 506 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 PLK1P53350 603 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 BCAT1P54687 386 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 OXCT1P55809 520 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP2K5Q13163 448 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 PLCL1Q15111 1095 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 WDTC1Q8N5D0 677 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 ICA1LQ8NDH6 482 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 LPCAT1Q8NF37 534 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 CENPKQ9BS16 269 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 PIF1Q9H611 641 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 STYXL1Q9Y6J8 313 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 NFASCO94856 1347 aa8.46□□□□□ -1.05
PTPDC1-204ENST00000620992 ARHGAP10A1A4S6 786 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 TYROBPO43914 113 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 AOC2O75106 756 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SMIM10L2AP0DMW4 78 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SMIM10L2BP0DMW5 78 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 PYGBP11216 843 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 BGNP21810 368 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINB3P29508 390 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 GRK4P32298 578 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 PDCD2Q16342 344 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 KBTBD12Q3ZCT8 623 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 DRICH1Q6PGQ1 229 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 RGS9BPQ6ZS82 235 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms