RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 KRT81Q14533 505 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 FSCBQ5H9T9 825 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 ANKS1BQ7Z6G8 1248 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 FAF2Q96CS3 445 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 XPO6Q96QU8 1125 aaKnown RBP23.33■■□□□ 1.33
CBWD3-213ENST00000618217 TMEM248Q9NWD8 314 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 NUP205Q92621 2012 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 LRRD1A4D1F6 860 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 KRBA1A5PL33 1030 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF487B1APH4 448 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 H3BRJ5 948 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 KRT1P04264 644 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ARL4AP40617 200 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 AMPD2Q01433 879 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 MLF2Q15773 248 aaPredicted RBP23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF569Q5MCW4 686 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 CXorf57Q6NSI4 855 aaKnown RBP23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ZSCAN30Q86W11 494 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 MAP7D3Q8IWC1 876 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 OR52K2Q8NGK3 314 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 EXD1Q8NHP7 514 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 MSANTD3Q96H12 275 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF670Q9BS34 389 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 FBRSL1Q9HCM7 1045 aaKnown RBP23.33■■□□□ 1.32
CBWD3-213ENST00000618217 ARHGEF4Q9NR80 690 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 DNAJC17Q9NVM6 304 aaKnown RBP23.33■■□□□ 1.32
CBWD3-213ENST00000618217 SLC27A6Q9Y2P4 619 aa23.33■■□□□ 1.32
CBWD3-213ENST00000618217 FGF10O15520 208 aaPredicted RBP23.32■■□□□ 1.32
CBWD3-213ENST00000618217 KIF5CO60282 957 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 TFAP2DQ7Z6R9 452 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 KIAA0907Q7Z7F0 614 aaPredicted RBP23.32■■□□□ 1.32
CBWD3-213ENST00000618217 MFN1Q8IWA4 741 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 RCOR2Q8IZ40 523 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 CARNMT1Q8N4J0 409 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 RTL3Q8N8U3 475 aaKnown RBP23.32■■□□□ 1.32
CBWD3-213ENST00000618217 RNF25Q96BH1 459 aaPredicted RBP23.32■■□□□ 1.32
CBWD3-213ENST00000618217 TLR10Q9BXR5 811 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 CALN1Q9BXU9 219 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 ARHGEF3Q9NR81 526 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 NDFIP2Q9NV92 336 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 CA14Q9ULX7 337 aa23.32■■□□□ 1.32
CBWD3-213ENST00000618217 MUC3AQ02505 3323 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ZRANB2O95218 330 aaKnown RBP eCLIP23.31■■□□□ 1.32
CBWD3-213ENST00000618217 SLC34A2O95436 690 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ERCC2P18074 760 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 HLA-FP30511 346 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 GALK1P51570 392 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 PRKCQQ04759 706 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF177Q13360 481 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ANKRD20A8PQ5CZ79 823 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 ZFYVE27Q5T4F4 411 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 MFSD7Q6UXD7 560 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 SLC35F6Q8N357 371 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 PCDH19Q8TAB3 1148 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 EDAQ92838 391 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 KLC2Q9H0B6 622 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 CATSPERBQ9H7T0 1116 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 DEC1Q9P2X7 70 aa23.31■■□□□ 1.32
CBWD3-213ENST00000618217 A0A0A0MRY4 1105 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 ESPNB1AK53 854 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 H0Y626 953 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 DCLK1O15075 740 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 AMPD1P23109 780 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 CDKN2BP42772 138 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 DGKGP49619 791 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 RWDD2BP57060 319 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 CDH18Q13634 790 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 DCAF12L1Q5VU92 463 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 TPRG1Q6ZUI0 275 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 SETD3Q86TU7 594 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-213ENST00000618217 UBL4BQ8N7F7 174 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.3■■□□□ 1.32
CBWD3-213ENST00000618217 PNKPQ96T60 521 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 P2RY13Q9BPV8 354 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 ETNK2Q9NVF9 386 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 DCXO43602 365 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 MSNP26038 577 aaKnown RBP23.3■■□□□ 1.32
CBWD3-213ENST00000618217 OR1E1P30953 314 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 CD70P32970 193 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 MAPKAPK2P49137 400 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 STARD6P59095 220 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 LMAN2Q12907 356 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 TMEM196Q5HYL7 178 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 SPOCD1Q6ZMY3 1216 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 PQLC3Q8N755 202 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 ZNF557Q8N988 423 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-213ENST00000618217 ALG14Q96F25 216 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 RNF157Q96PX1 679 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 NOL6Q9H6R4 1146 aaKnown RBP23.3■■□□□ 1.32
CBWD3-213ENST00000618217 ABCB8Q9NUT2 735 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 FBXL21Q9UKT6 434 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 JRKLQ9Y4A0 524 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 OR51B4Q9Y5P0 310 aa23.3■■□□□ 1.32
CBWD3-213ENST00000618217 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.29■■□□□ 1.32
CBWD3-213ENST00000618217 DAPK3O43293 454 aa23.29■■□□□ 1.32
CBWD3-213ENST00000618217 PYGMP11217 842 aa23.29■■□□□ 1.32
CBWD3-213ENST00000618217 RPS6KA1Q15418 735 aa23.29■■□□□ 1.32
CBWD3-213ENST00000618217 C1orf228Q6PIY5 440 aa23.29■■□□□ 1.32
CBWD3-213ENST00000618217 SIX5Q8N196 739 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms