RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RPS6P62753 249 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 LRRC23Q53EV4 343 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 PITRM1Q5JRX3 1037 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SPOPLQ6IQ16 392 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FOXR2Q6PJQ5 311 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CDK20Q8IZL9 346 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 LACRTQ9GZZ8 138 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 WHRNQ9P202 907 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SMAPO00193 183 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MAP2K7O14733 419 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 VTNP04004 478 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 KLHL30Q0D2K2 578 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CAPRIN2Q6IMN6 1127 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 GPR153Q6NV75 609 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZCCHC14Q8WYQ9 949 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 SPZ1Q9BXG8 430 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ROGDIQ9GZN7 287 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 DDX43Q9NXZ2 648 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 KIAA1257Q9ULG3 409 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ATXN2Q99700 1313 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 STX7O15400 261 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 MRPL1Q9BYD6 325 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 INHBAP08476 426 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 EIF4BP23588 611 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 PSMA2P25787 234 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.43□□□□□ -1.86
LPP-220ENST00000617246 CREB3L3Q68CJ9 461 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PTCHD1Q96NR3 888 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ARHGEF4Q9NR80 690 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ACRP10323 421 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 KLHL22Q53GT1 634 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ATAD3BQ5T9A4 648 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 KIAA0895LQ68EN5 471 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ATG14Q6ZNE5 492 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 LRRC74BQ6ZQY2 392 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SLC29A4Q7RTT9 530 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZADH2Q8N4Q0 377 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 NANOS1Q8WY41 292 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 TESCQ96BS2 214 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PLD4Q96BZ4 506 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 BOD1Q96IK1 185 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 VPS16Q9H269 839 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZNF304Q9HCX3 659 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 WDR6Q9NNW5 1121 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 PSME2Q9UL46 239 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 B4DGG1 531 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 DRD4P21917 467 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 NTSP30990 170 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TM4SF4P48230 202 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GEMP55040 296 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 RAB15P59190 212 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZMYND11Q15326 602 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZNF34Q8IZ26 560 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 REPS2Q8NFH8 660 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GDPD5Q8WTR4 605 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 NSUN4Q96CB9 384 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 TBC1D13Q9NVG8 400 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 COPG2Q9UBF2 871 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TMCC3Q9ULS5 477 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TAF4O00268 1085 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PIK3CGP48736 1102 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PDE1AP54750 535 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PTK6Q13882 451 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 UBE2SQ16763 222 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 INTS6LQ5JSJ4 861 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 HECTD3Q5T447 861 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CCDC25Q86WR0 208 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FSTL5Q8N475 847 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 ABHD5Q8WTS1 349 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CKAP2Q8WWK9 683 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 RBBP8Q99708 897 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 WDCPQ9H6R7 721 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 DCP1AQ9NPI6 582 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 COMMD8Q9NX08 183 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SERTAD3Q9UJW9 196 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MAFFQ9ULX9 164 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SPEF1Q9Y4P9 236 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FAM196BA6NMK8 535 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 C16orf96A6NNT2 1141 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 A6NNZ2 444 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ISM1B1AKI9 464 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CHURC1-FNTBB4DL54 471 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GOLGA8SH3BPF8 625 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ITGB8P26012 769 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 RPL3P39023 403 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 GRK6P43250 576 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 STK4Q13043 487 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 QRICH1Q2TAL8 776 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PTF1AQ7RTS3 328 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 COMMD2Q86X83 199 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ZNF614Q8N883 585 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 SLC22A18Q96BI1 424 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 EPB41L1Q9H4G0 881 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TMPRSS4Q9NRS4 437 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CFL2Q9Y281 166 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CTAGE15A4D2H0 777 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 H0YC42 278 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CFLARO15519 480 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CTAGE8P0CG41 777 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ACAT1P24752 427 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms