RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 C10orf71Q711Q0 1435 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 FKBP6O75344 327 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CABYRO75952 493 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TGDSO95455 350 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CHEK2O96017 543 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 OR1G1P47890 313 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SERPINB8P50452 374 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 USP4Q13107 963 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 FLOT2Q14254 428 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 IZUMO2Q6UXV1 221 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMC7Q7Z402 723 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PQLC3Q8N755 202 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRIML2Q8N7C3 387 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 BRD8Q9H0E9 1235 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 USP29Q9HBJ7 922 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 MAN1C1Q9NR34 630 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 ABT1Q9ULW3 272 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PTCH2Q9Y6C5 1203 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 LTBP3Q9NS15 1303 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 MYH13Q9UKX3 1938 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 MFSD11O43934 449 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SMIM10L2AP0DMW4 78 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SMIM10L2BP0DMW5 78 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC2A3P11169 496 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 AKR1A1P14550 325 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CD151P48509 253 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PITX1P78337 314 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CSHL1Q14406 222 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 C6orf10Q5SRN2 563 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 AHDC1Q5TGY3 1603 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM154Q6P9G4 183 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC30A9Q6PML9 568 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PRRT2Q7Z6L0 340 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TFAP2DQ7Z6R9 452 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 EFHBQ8N7U6 833 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC97Q96F63 343 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CADM1Q9BY67 442 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SUDS3Q9H7L9 328 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CHRAC1Q9NRG0 131 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TEX264Q9Y6I9 313 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TPSB2P20231 275 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 RGS2P41220 211 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CASP2P42575 452 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 BRCC3P46736 316 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF135P52742 658 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TPD52P55327 224 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TPSAB1Q15661 275 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TBCCQ15814 346 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 FSCN1Q16658 493 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPP1R15BQ5SWA1 713 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 RARS2Q5T160 578 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SYPL2Q5VXT5 272 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 AP1ARQ63HQ0 302 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 USP50Q70EL3 339 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SNX32Q86XE0 403 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 ARFGAP1Q8N6T3 406 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 CLEC4CQ8WTT0 213 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC7A6OSQ96CW6 309 aaPredicted RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 HNRNPABQ99729 332 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 MRPL1Q9BYD6 325 aaKnown RBP5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRIM4Q9C037 500 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 IL22Q9GZX6 179 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 YY1AP1Q9H869 796 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PTPRHQ9HD43 1115 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF358Q9NW07 568 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 NSMCE4AQ9NXX6 385 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 PLA2G4CQ9UP65 541 aa5.76□□□□□ -1.49
SYNCRIP-204ENST00000616122 UBTFL6P0CB48 400 aaPredicted RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 EPHA3P29320 983 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 PTPN7P35236 360 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 GEMP55040 296 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 SH3BGRP55822 239 aaPredicted RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 SLC12A1Q13621 1099 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 RAB6CQ53S08 254 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPM1JQ5JR12 505 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 IGDCC3Q8IVU1 814 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 KYQ8NBH2 561 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 RFWD2Q8NHY2 731 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 BLOC1S5Q8TDH9 187 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF184Q99676 751 aaPredicted RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 RAB6CQ9H0N0 254 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 UTP6Q9NYH9 597 aaKnown RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 TMEM216Q9P0N5 145 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZNF180Q9UJW8 692 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 ST3GAL5Q9UNP4 418 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 ROBO1Q9Y6N7 1651 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 GPR182O15218 404 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 TBX10O75333 385 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 TADA2AO75478 443 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 TUBP50607 506 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 CTBP1Q13363 440 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC142Q17RM4 750 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 PLEKHG4Q58EX7 1191 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 SCARA3Q6AZY7 606 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 IFNLR1Q8IU57 520 aaPredicted RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPHLN1Q8NEY8 458 aaKnown RBP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 BRI3BPQ8WY22 251 aa5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.75□□□□□ -1.49
SYNCRIP-204ENST00000616122 HIC2Q96JB3 615 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms