RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ATP2A2P16615 1042 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 YBX3P16989 372 aaKnown RBP eCLIP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IFNAR1P17181 557 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HLA-FP30511 346 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CIITAP33076 1130 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RCVRNP35243 200 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GALK1P51570 392 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 COPB1P53618 953 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 AP2S1P53680 142 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CARD18P57730 90 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 YWHAZP63104 245 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ASIC1P78348 528 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IFI35P80217 286 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ABATP80404 500 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ARHGAP8P85298 464 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GHRHRQ02643 423 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SCRN3Q0VDG4 424 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 STK4Q13043 487 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SEMA5AQ13591 1074 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ACAP2Q15057 778 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ADIPOQQ15848 244 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GSTA3Q16772 222 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 UGP2Q16851 508 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LIN52Q52LA3 116 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 USP39Q53GS9 565 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TTMPQ5BVD1 217 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 THEM4Q5T1C6 240 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RBM20Q5T481 1227 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IFIT1BQ5T764 474 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IZUMO3Q5VZ72 239 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LRRC8BQ6P9F7 803 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DCLRE1AQ6PJP8 1040 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CHD1LQ86WJ1 897 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC25Q86WR0 208 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MICU3Q86XE3 530 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FIBCD1Q8N539 461 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DPP10Q8N608 796 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SETD7Q8WTS6 366 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 COG1Q8WTW3 980 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ASZ1Q8WWH4 475 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NKD1Q969G9 470 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 COX4I2Q96KJ9 171 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 C1QTNF7Q9BXJ2 289 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TRIM2Q9C040 744 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DCLK3Q9C098 648 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PANK4Q9NVE7 773 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SCOCQ9UIL1 159 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PADI4Q9UM07 663 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RUVBL1Q9Y265 456 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TDRKHQ9Y2W6 561 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PCDHA5Q9Y5H7 936 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CSNK1G3Q9Y6M4 447 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SYNJ2O15056 1496 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PLXNC1O60486 1568 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PSME4Q14997 1843 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ATP8B3O60423 1300 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MAGI1Q96QZ7 1491 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 A0A0A0MRY4 1105 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 RNF103-CHMP3A0A140T963 221 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MTMR11A4FU01 709 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ARGFXA6NJG6 315 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF879B4DU55 563 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 H0YIN7 160 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 H7C0C1 242 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 RNF103O00237 685 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ADAMTS3O15072 1205 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AQP9O43315 295 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 LILRB5O75023 590 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CDC123O75794 336 aaPredicted RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ATP5HO75947 161 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 DDAH1O94760 285 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 FAM107AO95990 144 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HMOX1P09601 288 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ITGB6P18564 788 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SDSP20132 328 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ITGAXP20702 1163 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SSTR4P31391 388 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 RFC2P35250 354 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HSPA9P38646 679 aaKnown RBP3.11□□□□□ -1.91
CBWD3-209ENST00000614377 TECP42680 631 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NPY2RP49146 381 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 CASP5P51878 434 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AIF1P55008 147 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 AP1S2P56377 157 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 GNG2P59768 71 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ERVK-21P61565 698 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 GNGT1P63211 74 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 MAPK6Q16659 721 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 KYAT1Q16773 422 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SPATS1Q496A3 300 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 C1orf141Q5JVX7 400 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 OLFML2BQ68BL8 750 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 HGSNATQ68CP4 663 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 NIPAL1Q6NVV3 410 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 ERICH5Q6P6B1 374 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 SUSD1Q6UWL2 747 aa3.11□□□□□ -1.91
CBWD3-209ENST00000614377 PRR23CQ6ZRP0 262 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms