RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MIR1-1HGQ9H1L0 117 aa22.53■■□□□ 1.2
CBWD3-207ENST00000611426 TLR6Q9Y2C9 796 aa22.53■■□□□ 1.2
CBWD3-207ENST00000611426 TYW5A2RUC4 315 aaKnown RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 IGLV3-19P01714 112 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 DLDP09622 509 aaKnown RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 POLR2EP19388 210 aaKnown RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 CD70P32970 193 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 PTPRNQ16849 979 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 DCAF12L1Q5VU92 463 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 NADSYN1Q6IA69 706 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 TRIM65Q6PJ69 517 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 FAM124AQ86V42 546 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 MFN1Q8IWA4 741 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 ADAM32Q8TC27 787 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 WFDC5Q8TCV5 224 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 STK32AQ8WU08 396 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 FCRL2Q96LA5 508 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 SLC4A5Q9BY07 1137 aa22.52■■□□□ 1.2
CBWD3-207ENST00000611426 DNAAF2Q9NVR5 837 aaKnown RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 ZNHIT6Q9NWK9 470 aaKnown RBP22.52■■□□□ 1.2
CBWD3-207ENST00000611426 A0A1B0GTW7 788 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 METTL12A8MUP2 240 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 THAP12O43422 761 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 UCHL3P15374 230 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 GNA15P30679 374 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 NNTQ13423 1086 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 RAD9BQ6WBX8 426 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 HJURPQ8NCD3 748 aaPredicted RBP22.51■■□□□ 1.19
CBWD3-207ENST00000611426 FAM81BQ96LP2 452 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 TRIM62Q9BVG3 475 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 LHX5Q9H2C1 402 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 FRYQ5TBA9 3013 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 CACNA1EQ15878 2313 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 USP24Q9UPU5 2620 aa22.51■■□□□ 1.19
CBWD3-207ENST00000611426 SLC9A1P19634 815 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 USP8P40818 1118 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SYPL2Q5VXT5 272 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 GJB7Q6PEY0 223 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 BEND5Q7L4P6 421 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 CCDC117Q8IWD4 279 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 CCDC170Q8IYT3 715 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 C17orf53Q8N3J3 647 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ZCCHC9Q8N567 271 aaKnown RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 FIBINQ8TAL6 211 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SLC39A13Q96H72 371 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ACP6Q9NPH0 428 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 AIPL1Q9NZN9 384 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SUN2Q9UH99 717 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SPAARA0A1B0GVQ0 90 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 GOLGA6L9A6NEM1 432 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SOWAHDA6NJG2 315 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 E5RJQ4 531 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 PAPSS1O43252 624 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ZSCAN12O43309 604 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 TOP3BO95985 862 aaKnown RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 MOCS2O96007 188 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SPINK2P20155 84 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 POLR2FP61218 127 aaKnown RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 RPS24P62847 133 aaKnown RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SIM1P81133 766 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ARHGAP44Q17R89 818 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 TMEM110Q86TL2 294 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 TAC4Q86UU9 113 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 CARNMT1Q8N4J0 409 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 MYEOVQ96EZ4 313 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 PRICKLE1Q96MT3 831 aaPredicted RBP22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ZDHHC5Q9C0B5 715 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 FBRSQ9HAH7 460 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 POPDC2Q9HBU9 364 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 PRSS16Q9NQE7 514 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 CYTH4Q9UIA0 394 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 WASF3Q9UPY6 502 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 ADGRG1Q9Y653 693 aa22.5■■□□□ 1.19
CBWD3-207ENST00000611426 SSU72P8A0A1W2PR75 194 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 LRRC53A6NM62 1247 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 CD59P13987 128 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 JAM2P57087 298 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 YWHAZP63104 245 aaKnown RBP22.49■■□□□ 1.19
CBWD3-207ENST00000611426 GRIK2Q13002 908 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 SLC14A1Q13336 389 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 MS4A13Q5J8X5 152 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 SMYD5Q6GMV2 418 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 NYAP1Q6ZVC0 841 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 CFAP52Q8N1V2 620 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 TTC17Q96AE7 1141 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 LMLNQ96KR4 655 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 EIF2B4Q9UI10 523 aaKnown RBP22.49■■□□□ 1.19
CBWD3-207ENST00000611426 PPP2R2CQ9Y2T4 447 aa22.49■■□□□ 1.19
CBWD3-207ENST00000611426 MUC22E2RYF6 1773 aaPredicted RBP22.48■■□□□ 1.19
CBWD3-207ENST00000611426 BCAT2O15382 392 aaPredicted RBP22.48■■□□□ 1.19
CBWD3-207ENST00000611426 APOEP02649 317 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 DNTTP04053 509 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 TUBB4AP04350 444 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 ACSL1P33121 698 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 ST8SIA6P61647 398 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 RPS14P62263 151 aaKnown RBP22.48■■□□□ 1.19
CBWD3-207ENST00000611426 ZBTB16Q05516 673 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 MAPK8IP2Q13387 824 aaPredicted RBP22.48■■□□□ 1.19
CBWD3-207ENST00000611426 CDH18Q13634 790 aa22.48■■□□□ 1.19
CBWD3-207ENST00000611426 PPP1R13BQ96KQ4 1090 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms