RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 A0A1W2PPM1 405 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ERI2A8K979 691 aaKnown RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CA4P22748 312 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TBX4P57082 545 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 IKBKEQ14164 716 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 QPCTQ16769 361 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CASC4Q6P4E1 433 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 RNF19BQ6ZMZ0 732 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 LRRC34Q8IZ02 419 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MPP5Q8N3R9 675 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ATPAF2Q8N5M1 289 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 PPM1NQ8N819 430 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 GDAP1Q8TB36 358 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 GPR152Q8TDT2 470 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 DEPDC1BQ8WUY9 529 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ALKBH8Q96BT7 664 aaKnown RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 NAT9Q9BTE0 207 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 GBA3Q9H227 469 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SOAT2O75908 522 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 UPP2O95045 317 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MT-ND3P03897 115 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 KRT4P19013 534 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TEX44Q53QW1 395 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 PRPF39Q86UA1 669 aaKnown RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CACNA2D3Q8IZS8 1091 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MZB1Q8WU39 189 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 BCL7CQ8WUZ0 217 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SLC39A13Q96H72 371 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 C1orf74Q96LT6 269 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 HS3ST4Q9Y661 456 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 E9PAM4 449 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 DFFAO00273 331 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TUBP50607 506 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MLLT6P55198 1093 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SESN2P58004 480 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 EFEMP1Q12805 493 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TAF10Q12962 218 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SPARCL1Q14515 664 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 LGSNQ5TDP6 509 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 C1orf53Q5VUE5 145 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ICE2Q659A1 982 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 NUGGCQ68CJ6 796 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 PRSS55Q6UWB4 352 aaPredicted RBP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MAGEB18Q96M61 343 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 AGAP3Q96P47 875 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 TSGA13Q96PP4 275 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 PLAC1Q9HBJ0 212 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01278-204ENST00000609143 SAMD15Q9P1V8 674 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 ZNF180Q9UJW8 692 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
LINC01278-204ENST00000609143 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TCP11X1B4DZS4 312 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TYROBPO43914 113 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 KRT37O76014 449 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 ZWINTO95229 277 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 AP2A1O95782 977 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 PGAM1P18669 254 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 CCNCP24863 283 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 ZBTB17Q13105 803 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 DUSP4Q13115 394 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TTC39BQ5VTQ0 682 aaPredicted RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 STEAP4Q687X5 459 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 CYS1Q717R9 158 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 PAIP2Q9BPZ3 127 aaKnown RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 ARHGAP42A6NI28 874 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 KIAA0754O94854 1291 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 SUN1O94901 812 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 VNN2O95498 520 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 JCHAINP01591 159 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 C1QAP02745 245 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 NFKB1P19838 968 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 MGAT1P26572 445 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TRIP4Q15650 581 aaPredicted RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 SEPT7Q16181 437 aaKnown RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 DENND1AQ8TEH3 1009 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 MARCH2Q9P0N8 246 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms