RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ASLP04424 464 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NFATC3Q12968 1075 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PIK3R6Q5UE93 754 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 INO80CQ6PI98 192 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZNF557Q8N988 423 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OR4C6Q8NH72 309 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LMLNQ96KR4 655 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PRICKLE1Q96MT3 831 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 FAM129BQ96TA1 746 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 UBXN6Q9BZV1 441 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 UCKL1Q9NWZ5 548 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 IL17BQ9UHF5 180 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 INTS6Q9UL03 887 aaKnown RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CA5BQ9Y2D0 317 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MORC2Q9Y6X9 1032 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 EDDM13A0A1B0GTR0 161 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TULP2O00295 520 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IKBKBO14920 756 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MAGEC1O60732 1142 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RTN2O75298 545 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IL1BP01584 269 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NR3C1P04150 777 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CKMT1AP12532 417 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MYF5P13349 255 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 C5AR1P21730 350 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DGKAP23743 735 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MZF1P28698 734 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC6A4P31645 630 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC11A2P49281 568 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 METAP1P53582 386 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC8A3P57103 927 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 OVGP1Q12889 678 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FAM133BQ5BKY9 247 aaKnown RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PITRM1Q5JRX3 1037 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 BSPRYQ5W0U4 402 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CEP135Q66GS9 1140 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PRPF39Q86UA1 669 aaKnown RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 STK40Q8N2I9 435 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KDM1BQ8NB78 822 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 HJURPQ8NCD3 748 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ABCG4Q9H172 646 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ARHGAP20Q9P2F6 1191 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CYTH4Q9UIA0 394 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TMEM131Q92545 1883 aa12.2□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TARSL2A2RTX5 802 aaKnown RBP12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 YJEFN3A6XGL0 299 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 E7ENQ6 273 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IRAK2O43187 625 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PDCP20941 246 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DRD3P35462 400 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 GCLMP48507 274 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CDH18Q13634 790 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ELAVL3Q14576 367 aaKnown RBP12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 STAT4Q14765 748 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 POM121L1PQ3SYA9 428 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 COLEC12Q5KU26 742 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RNF219Q5W0B1 726 aaPredicted RBP12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CCDC81Q6ZN84 652 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CARNMT1Q8N4J0 409 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ANKRD52Q8NB46 1076 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MAPK15Q8TD08 544 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TATDN2Q93075 761 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MYEOVQ96EZ4 313 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 LRRC4Q9HBW1 653 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SATB2Q9UPW6 733 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DMTF1Q9Y222 760 aa12.19□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SPTAN1Q13813 2472 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ITIH6Q6UXX5 1313 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TYW5A2RUC4 315 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ACSL4O60488 711 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms