RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 MTAPQ13126 283 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 GAS6Q14393 721 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 GEN1Q17RS7 908 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 ALFQ53S48 1182 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 FSCBQ5H9T9 825 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 FAM72AQ5TYM5 149 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 FAM72DQ6L9T8 149 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
RNF40-212ENST00000602784 Q6ZS52 159 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 TRMT11Q7Z4G4 463 aaKnown RBP14.29□□□□□ -0.12
RNF40-212ENST00000602784 FAM72BQ86X60 149 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 UCMAQ8WVF2 138 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 TTC17Q96AE7 1141 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 PRRX2Q99811 253 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 EPAS1Q99814 870 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
RNF40-212ENST00000602784 ZNF212Q9UDV6 495 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 KMT2EQ8IZD2 1858 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 NRDCO43847 1150 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 CNTN5O94779 1100 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 PAPSS2O95340 614 aaPredicted RBP14.28□□□□□ -0.12
RNF40-212ENST00000602784 MOCS3O95396 460 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 IL1R2P27930 398 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 SLC1A1P43005 524 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 CCR3P51677 355 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 SLC25A11Q02978 314 aaKnown RBP14.28□□□□□ -0.12
RNF40-212ENST00000602784 LMAN2Q12907 356 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 MESDQ14696 234 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 HADHQ16836 314 aaKnown RBP14.28□□□□□ -0.12
RNF40-212ENST00000602784 C2orf27AQ580R0 203 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 TMEM215Q68D42 235 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 ZNF783Q6ZMS7 281 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 SYT13Q7L8C5 426 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 ADIPOR2Q86V24 386 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 CIR1Q86X95 450 aaPredicted RBP14.28□□□□□ -0.12
RNF40-212ENST00000602784 C1orf210Q8IVY1 113 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 DOCK4Q8N1I0 1966 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 PYROXD2Q8N2H3 581 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 IL17RCQ8NAC3 791 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 RPLP0P6Q8NHW5 317 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 ACDQ96AP0 544 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 FEM1AQ9BSK4 669 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 MAGEB5Q9BZ81 275 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 KCNH6Q9H252 994 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 DHX35Q9H5Z1 703 aaKnown RBP14.28□□□□□ -0.12
RNF40-212ENST00000602784 TMEM248Q9NWD8 314 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 DONSONQ9NYP3 566 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 MPP6Q9NZW5 540 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 HCN2Q9UL51 889 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 NEU3Q9UQ49 428 aa14.28□□□□□ -0.12
RNF40-212ENST00000602784 ILVBLA1L0T0 632 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 WASH4PA8MWX3 477 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 ASLP04424 464 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 KRT7P08729 469 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 DLDP09622 509 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 RARAP10276 462 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 TCF4P15884 667 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 POLR2EP19388 210 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 OR1E1P30953 314 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 MAPKAPK2P49137 400 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 SEC13P55735 322 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 DPYSL2Q16555 572 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 PLEKHG6Q3KR16 790 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 PITRM1Q5JRX3 1037 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 EMC10Q5UCC4 262 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 DAB2IPQ5VWQ8 1189 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 RWDD4Q6NW29 188 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 NLRP14Q86W24 1093 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 ZNF513Q8N8E2 541 aaPredicted RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 ALG14Q96F25 216 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 SPATA6Q9NWH7 488 aaPredicted RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 THAP10Q9P2Z0 257 aaPredicted RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 INTS6Q9UL03 887 aaKnown RBP14.27□□□□□ -0.13
RNF40-212ENST00000602784 MMP17Q9ULZ9 603 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 OR51B4Q9Y5P0 310 aa14.27□□□□□ -0.13
RNF40-212ENST00000602784 LAMTOR5O43504 91 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 CREB3O43889 395 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 EPHB2P29323 1055 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 NTSR1P30989 418 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 HOXA6P31267 233 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 TIE1P35590 1138 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 CXCL12P48061 93 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
RNF40-212ENST00000602784 TPI1P60174 286 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 SULT2A1Q06520 285 aa14.26□□□□□ -0.13
RNF40-212ENST00000602784 KIF5AQ12840 1032 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms