RNA–Protein interactions for RNA: ENST00000602708.1

DENND4C-208, Transcript of DENN domain containing 4C, human

TSL 4

Gene DENND4C, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4C-208	ENST00000602708	ZNF12	P17014	697 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	FGFR2	P21802	821 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	PIK3CB	P42338	1070 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	EEF1A2	Q05639	463 aa	Known RBP	3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	ZNF543	Q08ER8	600 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	PMPCA	Q10713	525 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	GBX1	Q14549	363 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	SLC5A9	Q2M3M2	681 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	FNBP1L	Q5T0N5	605 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	KRTAP5-4	Q6L8H1	288 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708		Q6ZSV7	163 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	MDGA2	Q7Z553	956 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	KDM1B	Q8NB78	822 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	SLC22A17	Q8WUG5	538 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	EIF3C	Q99613	913 aa	Known RBP	3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	GDF15	Q99988	308 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	ZNF304	Q9HCX3	659 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	PCDHB7	Q9Y5E2	793 aa		3.9	□□□□□ -1.79
DENND4C-208	ENST00000602708	TSHR	P16473	764 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	RPL17	P18621	184 aa	Known RBP	3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	HOXD3	P31249	432 aa	Predicted RBP	3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	PPP2R5A	Q15172	486 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	ZNF718	Q3SXZ3	478 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	PPP4R4	Q6NUP7	873 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	KRT27	Q7Z3Y8	459 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	GRAMD1A	Q96CP6	724 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	WBP1	Q96G27	269 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	NUDT22	Q9BRQ3	303 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	MAGEB5	Q9BZ81	275 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	PNPLA8	Q9NP80	782 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	KCNK9	Q9NPC2	374 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	FZD10	Q9ULW2	581 aa		3.89	□□□□□ -1.79
DENND4C-208	ENST00000602708	SCN5A	Q14524	2016 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	LMTK3	Q96Q04	1460 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	POM121B	A6NF01	834 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	TAF5L	O75529	589 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	VIP	P01282	170 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	UMOD	P07911	640 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	ITGA5	P08648	1049 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	ALDOC	P09972	364 aa	Known RBP	3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	EGR1	P18146	543 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	DLX5	P56178	289 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	TRAF3	Q13114	568 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	HNF4G	Q14541	408 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	OTUD3	Q5T2D3	398 aa	Predicted RBP	3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	DCAF12L2	Q5VW00	463 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	SPSB3	Q6PJ21	355 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	APOLD1	Q96LR9	279 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	PNRC2	Q9NPJ4	139 aa	Known RBP	3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	FBXO28	Q9NVF7	368 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	EID1	Q9Y6B2	187 aa		3.88	□□□□□ -1.79
DENND4C-208	ENST00000602708	RHPN2P1	A8MT19	583 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708		J3KTA2	159 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	KPNA5	O15131	536 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	FCGR1A	P12314	374 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	MYL4	P12829	197 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	IGFBP2	P18065	325 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	TNFSF8	P32971	234 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	IGBP1	P78318	339 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	CBFB	Q13951	182 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	GALNT3	Q14435	633 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	DUSP6	Q16828	381 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	PLEKHG6	Q3KR16	790 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	USP17L6P	Q6QN14	398 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	ZNF367	Q7RTV3	350 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	CLIP4	Q8N3C7	705 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	SLC25A41	Q8N5S1	370 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	GLIS1	Q8NBF1	620 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	NEXN-AS1	Q8NBZ9	246 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	SRFBP1	Q8NEF9	429 aa	Known RBP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	PMM1	Q92871	262 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	ADAD1	Q96M93	576 aa	Known RBP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	PAAF1	Q9BRP4	392 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	C1QTNF4	Q9BXJ3	329 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	NUP62CL	Q9H1M0	184 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	MYO1A	Q9UBC5	1043 aa		3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	UBE2J1	Q9Y385	318 aa	Predicted RBP	3.87	□□□□□ -1.79
DENND4C-208	ENST00000602708	LOC105369274	A0A096LPK9	316 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	LOC102723532	A0A0G2JNH3	316 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708		A0A1W2PPC4	97 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	MSI1	O43347	362 aa	Known RBP	3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	SOCS5	O75159	536 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	GLUD1	P00367	558 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	PRSS2	P07478	247 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	SRGAP2B	P0DMP2	458 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	CHRNB2	P17787	502 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	KCNJ4	P48050	445 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	GLUD2	P49448	558 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	FOXL2	P58012	376 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	ARL13A	Q5H913	290 aa	Predicted RBP	3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	OTUD1	Q5VV17	481 aa	Predicted RBP	3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	MEX3B	Q6ZN04	569 aa	Known RBP	3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	FAM217A	Q8IXS0	508 aa		3.86	□□□□□ -1.79
DENND4C-208	ENST00000602708	OR4N4	Q8N0Y3	316 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms