RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 MID1O15344 667 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 THAP12O43422 761 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 MOCS3O95396 460 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 TRUB2O95900 331 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 SRPRAP08240 638 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 TACR2P21452 398 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 GNA15P30679 374 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 GALCP54803 685 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 YWHAZP63104 245 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 ECT2LQ008S8 904 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 ARID5BQ14865 1188 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 NCEH1Q6PIU2 408 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 TMEM110Q86TL2 294 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 BTN2A3PQ96KV6 586 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 RPL10LQ96L21 214 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 MED15Q96RN5 788 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 NEUROG2Q9H2A3 272 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 POPDC2Q9HBU9 364 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 TJP2Q9UDY2 1190 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 SLCO3A1Q9UIG8 710 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 EDDM13A0A1B0GTR0 161 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 A0A1W2PPC4 97 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 H0Y8X5 98 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 RNASEH2AO75792 299 aaKnown RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 IGLV3-25P01717 112 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 SLC8A1P32418 973 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 CTSKP43235 329 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 NUMBP49757 651 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 CCT8P50990 548 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 C21orf59P57076 290 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 RACK1P63244 317 aaKnown RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 IL9RQ01113 521 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 TAF5Q15542 800 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 MEA1Q16626 185 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 GJB7Q6PEY0 223 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 ENOSF1Q7L5Y1 443 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 SLC6A18Q96N87 628 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 FAM129BQ96TA1 746 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 OMDQ99983 421 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 CRACR2AQ9BSW2 395 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 ACE2Q9BYF1 805 aaPredicted RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 CCDC86Q9H6F5 360 aaKnown RBP13.6□□□□□ -0.23
RPS28-204ENST00000602140 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
RPS28-204ENST00000602140 LRRC72A6NJI9 287 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 KCNU1A8MYU2 1149 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 F5H5T6 163 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 VILLO15195 856 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 PCDHGA12O60330 932 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 DKK1O94907 266 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
RPS28-204ENST00000602140 USP8P40818 1118 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 GRK6P43250 576 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 PSMD8P48556 350 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 STK19P49842 368 aaPredicted RBP13.59□□□□□ -0.23
RPS28-204ENST00000602140 PDCLQ13371 301 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 TMPRSS7Q7RTY8 843 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
RPS28-204ENST00000602140 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 STK40Q8N2I9 435 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 ATP6V0D2Q8N8Y2 350 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 OR2T34Q8NGX1 318 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 EBF2Q9HAK2 575 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
RPS28-204ENST00000602140 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 SLC12A6Q9UHW9 1150 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 ITIH6Q6UXX5 1313 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 TMEM131Q92545 1883 aa13.59□□□□□ -0.23
RPS28-204ENST00000602140 SYNJ2BP-COX16A0A087WUM0 186 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 BECN2A8MW95 431 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 TNFSF14O43557 240 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 DFNA5O60443 496 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 WNT1P04628 370 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 HOXB3P14651 431 aaPredicted RBP13.58□□□□□ -0.24
RPS28-204ENST00000602140 VAV1P15498 845 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 SLC9A1P19634 815 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 MZF1P28698 734 aaPredicted RBP13.58□□□□□ -0.24
RPS28-204ENST00000602140 NNMTP40261 264 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 CDK17Q00537 523 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 APBA1Q02410 837 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 EIF4EBP2Q13542 120 aaPredicted RBP13.58□□□□□ -0.24
RPS28-204ENST00000602140 SLC12A1Q13621 1099 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 KCNJ12Q14500 433 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms