RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-225	ENST00000601453	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-225	ENST00000601453	CREB3L2	Q70SY1	520 aa		4.06	□□□□□ -1.76
ATM-225	ENST00000601453	ADPRHL1	Q8NDY3	354 aa		4.06	□□□□□ -1.76
ATM-225	ENST00000601453	JDP2	Q8WYK2	163 aa		4.06	□□□□□ -1.76
ATM-225	ENST00000601453	LRRC46	Q96FV0	321 aa		4.06	□□□□□ -1.76
ATM-225	ENST00000601453	WDR77	Q9BQA1	342 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-225	ENST00000601453	KRTAP4-4	Q9BYR3	166 aa		4.06	□□□□□ -1.76
ATM-225	ENST00000601453	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ATM-225	ENST00000601453	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-225	ENST00000601453		I6L893	689 aa	Predicted RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	SLC16A5	O15375	505 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	KRT36	O76013	467 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	VIP	P01282	170 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	CLCN5	P51795	746 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	DLX5	P56178	289 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	POLE2	P56282	527 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	KRTAP10-12	P60413	245 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	DDR1	Q08345	913 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	SEMA5A	Q13591	1074 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	MRGPRG-AS1	Q2M3A8	158 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	SLC5A9	Q2M3M2	681 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	P3H1	Q32P28	736 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	ZNF672	Q499Z4	452 aa	Predicted RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	ALG10	Q5BKT4	473 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	ALG10B	Q5I7T1	473 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	CCDC181	Q5TID7	509 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	RAP1GAP2	Q684P5	730 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	WBP2NL	Q6ICG8	309 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	PPP4R4	Q6NUP7	873 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	KRT27	Q7Z3Y8	459 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	TCEAL8	Q8IYN2	117 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	ADGRF3	Q8IZF5	1079 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	CLIP4	Q8N3C7	705 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	MAGEB6	Q8N7X4	407 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	NPIPB3	Q92617	1050 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	GRAMD1A	Q96CP6	724 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	RTP4	Q96DX8	246 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	C1QTNF4	Q9BXJ3	329 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	MAGEB5	Q9BZ81	275 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	CATSPERB	Q9H7T0	1116 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	DDX31	Q9H8H2	851 aa	Known RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	TXNRD2	Q9NNW7	524 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	PNPLA8	Q9NP80	782 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	KCNK9	Q9NPC2	374 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	PNRC2	Q9NPJ4	139 aa	Known RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	RNF146	Q9NTX7	359 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	FBXO28	Q9NVF7	368 aa		4.05	□□□□□ -1.76
ATM-225	ENST00000601453	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.05	□□□□□ -1.76
ATM-225	ENST00000601453	GXYLT2	A0PJZ3	443 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	CXorf65	A6NEN9	183 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	MYL4	P12829	197 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	GALNT3	Q14435	633 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	TDRD12	Q587J7	1177 aa	Known RBP	4.04	□□□□□ -1.76
ATM-225	ENST00000601453	C10orf76	Q5T2E6	689 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	H1FNT	Q75WM6	255 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-225	ENST00000601453	MUC20	Q8N307	709 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-225	ENST00000601453	SLC25A41	Q8N5S1	370 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	ATP11C	Q8NB49	1132 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	KDM1B	Q8NB78	822 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	PHKB	Q93100	1093 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	INPP4A	Q96PE3	977 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-225	ENST00000601453	CHMP4A	Q9BY43	222 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	NUP62CL	Q9H1M0	184 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	SFXN1	Q9H9B4	322 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	TCEAL9	Q9UHQ7	104 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-225	ENST00000601453	TNFSF13B	Q9Y275	285 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	LMTK3	Q96Q04	1460 aa		4.04	□□□□□ -1.76
ATM-225	ENST00000601453	DOCK7	Q96N67	2140 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	PLSCR5	A0PG75	271 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	NPC1	O15118	1278 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	DHH	O43323	396 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	PARN	O95453	639 aa	Known RBP	4.03	□□□□□ -1.76
ATM-225	ENST00000601453	CHRNB2	P17787	502 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	IGFBP2	P18065	325 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	SHC2	P98077	582 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	DUSP6	Q16828	381 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	MSANTD2	Q6P1R3	559 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	WDR93	Q6P2C0	686 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	CAMK1D	Q8IU85	385 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	CCDC150	Q8NCX0	1101 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.03	□□□□□ -1.76
ATM-225	ENST00000601453	PAAF1	Q9BRP4	392 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	PCDHAC1	Q9H158	963 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	CHPF2	Q9P2E5	772 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	SNX13	Q9Y5W8	968 aa		4.03	□□□□□ -1.76
ATM-225	ENST00000601453	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.02	□□□□□ -1.77
ATM-225	ENST00000601453	LOC102724159	A0A0B4J2E5	919 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	VWA5A	O00534	786 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	MSI1	O43347	362 aa	Known RBP	4.02	□□□□□ -1.77
ATM-225	ENST00000601453	SCGB1D2	O95969	90 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	ZNF12	P17014	697 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	KRTAP5-9	P26371	169 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	SLC16A2	P36021	539 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	PWP2	Q15269	919 aa	Known RBP	4.02	□□□□□ -1.77
ATM-225	ENST00000601453	ZRSR1	Q15695	479 aa	Known RBP	4.02	□□□□□ -1.77
ATM-225	ENST00000601453	KIF19	Q2TAC6	998 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453	FSCB	Q5H9T9	825 aa		4.02	□□□□□ -1.77
ATM-225	ENST00000601453		Q6ZSV7	163 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms