RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 TRHDEQ9UKU6 1024 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 E7ESA3 106 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 GOLGA8MH3BSY2 632 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 TBX18O95935 607 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 CNPP09543 421 aaKnown RBP20.59■□□□□ 0.89
PNKP-214ENST00000600573 RHOQP17081 205 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 TPSB2P20231 275 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 GARSP41250 739 aaKnown RBP20.59■□□□□ 0.89
PNKP-214ENST00000600573 SLCO1A2P46721 670 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 AUHQ13825 339 aaKnown RBP20.59■□□□□ 0.89
PNKP-214ENST00000600573 TPSAB1Q15661 275 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 SKIDA1Q1XH10 827 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 ANKRD20A2Q5SQ80 823 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 ANKRD20A1Q5TYW2 823 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 ANKRD20A3Q5VUR7 823 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 MIB1Q86YT6 1006 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 ZBED8Q8IZ13 594 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 RIBC1Q8N443 379 aaPredicted RBP20.59■□□□□ 0.89
PNKP-214ENST00000600573 RTL3Q8N8U3 475 aaKnown RBP20.59■□□□□ 0.89
PNKP-214ENST00000600573 PLD4Q96BZ4 506 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 TSGA13Q96PP4 275 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 LGMNQ99538 433 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 CCSER2Q9H7U1 834 aa20.59■□□□□ 0.89
PNKP-214ENST00000600573 IGLV3-10A0A075B6K4 115 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 MAP3K6O95382 1288 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 MOCS2O96007 188 aaPredicted RBP20.58■□□□□ 0.89
PNKP-214ENST00000600573 CCNCP24863 283 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 HARS2P49590 506 aaKnown RBP20.58■□□□□ 0.89
PNKP-214ENST00000600573 LONRF1Q17RB8 773 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 PARP6Q2NL67 630 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 TNFAIP8L3Q5GJ75 292 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 MS4A13Q5J8X5 152 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 LILRA6Q6PI73 481 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 TAB3Q8N5C8 712 aaPredicted RBP20.58■□□□□ 0.89
PNKP-214ENST00000600573 KLHL5Q96PQ7 755 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 ZYG11BQ9C0D3 744 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 NEU3Q9UQ49 428 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 MFHAS1Q9Y4C4 1052 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 SNX10Q9Y5X0 201 aa20.58■□□□□ 0.89
PNKP-214ENST00000600573 DRGXA6NNA5 263 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 C5orf67F2Z3F1 127 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 LPXNO60711 386 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 CTNNB1P35222 781 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 SLC11A2P49281 568 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 NDST2P52849 883 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 NRLP54845 237 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 SEMA5AQ13591 1074 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 FASTKD3Q14CZ7 662 aaKnown RBP20.57■□□□□ 0.88
PNKP-214ENST00000600573 PIK3R6Q5UE93 754 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 CCDC13Q8IYE1 715 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 ATP11CQ8NB49 1132 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 CCDC110Q8TBZ0 833 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 AUTS2Q8WXX7 1259 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 PPCSQ9HAB8 311 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 ETNK1Q9HBU6 452 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 EIF2B3Q9NR50 452 aaKnown RBP20.57■□□□□ 0.88
PNKP-214ENST00000600573 IGSF9Q9P2J2 1179 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 LGALS13Q9UHV8 139 aa20.57■□□□□ 0.88
PNKP-214ENST00000600573 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.57■□□□□ 0.88
PNKP-214ENST00000600573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.56■□□□□ 0.88
PNKP-214ENST00000600573 TCRBV7S3A2A0A539 114 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 TGM5O43548 720 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 VAV1P15498 845 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 PFKLP17858 780 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 PHBP35232 272 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 MDH1P40925 334 aaKnown RBP20.56■□□□□ 0.88
PNKP-214ENST00000600573 IRAK1P51617 712 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 TIGD7Q6NT04 549 aaPredicted RBP20.56■□□□□ 0.88
PNKP-214ENST00000600573 TAOK1Q7L7X3 1001 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 ZNF683Q8IZ20 524 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 MRPL43Q8N983 215 aaKnown RBP20.56■□□□□ 0.88
PNKP-214ENST00000600573 SAMD11Q96NU1 681 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 PPP1R2P1Q96PQ5 205 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 DDX50Q9BQ39 737 aaKnown RBP20.56■□□□□ 0.88
PNKP-214ENST00000600573 VPS37BQ9H9H4 285 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 GREB1Q4ZG55 1949 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 RNF103O00237 685 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 CDH16O75309 829 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 LRG1P02750 347 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 CA8P35219 290 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 C5orf22Q49AR2 442 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 FNBP1LQ5T0N5 605 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 AFMIDQ63HM1 303 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 ITPRIPL1Q6GPH6 555 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 UMODL1-AS1Q8N2C9 162 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 ELMOD1Q8N336 334 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 NPWQ8N729 165 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 PYROXD1Q8WU10 500 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 FATE1Q969F0 183 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 LRRC39Q96DD0 335 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 TCF25Q9BQ70 676 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 TMEM248Q9NWD8 314 aa20.56■□□□□ 0.88
PNKP-214ENST00000600573 EXOC1LA0A1B0GW35 172 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 E7EVH7 732 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 LATS1O95835 1130 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 GAD2Q05329 585 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 WASHC5Q12768 1159 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 BBS9Q3SYG4 887 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 ARTNQ5T4W7 220 aa20.55■□□□□ 0.88
PNKP-214ENST00000600573 PDE12Q6L8Q7 609 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms