RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HJURPQ8NCD3 748 aaPredicted RBP12.48□□□□□ -0.41
ZNF548-209ENST00000598895 ACRBPQ8NEB7 543 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 AZIN2Q96A70 460 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
ZNF548-209ENST00000598895 TKTL2Q9H0I9 626 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 SLC12A6Q9UHW9 1150 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 SLC27A6Q9Y2P4 619 aa12.48□□□□□ -0.41
ZNF548-209ENST00000598895 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 PROB1E7EW31 1015 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 F5H5T6 163 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 AXIN1O15169 862 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-209ENST00000598895 HRO43593 1189 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 LILRB5O75023 590 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 PAGE1O75459 146 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 APBB3O95704 486 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 CALB1P05937 261 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 IVLP07476 585 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SLC2A3P11169 496 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 NTSR1P30989 418 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 IRAK1P51617 712 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SLC25A52Q3SY17 297 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
ZNF548-209ENST00000598895 FSCBQ5H9T9 825 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SH3PXD2AQ5TCZ1 1133 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SDE2Q6IQ49 451 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF548-209ENST00000598895 CHST9Q7L1S5 443 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 MON1BQ7L1V2 547 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 KIAA1328Q86T90 577 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 WDR5BQ86VZ2 330 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 FAM131BQ86XD5 332 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 PGBD3Q8N328 593 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 CYB5D2Q8WUJ1 264 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 HMGB4Q8WW32 186 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SYT11Q9BT88 431 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 SLC2A11Q9BYW1 496 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 IRX2Q9BZI1 471 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-209ENST00000598895 WDCPQ9H6R7 721 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 RRN3Q9NYV6 651 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 AIPL1Q9NZN9 384 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF548-209ENST00000598895 GGA2Q9UJY4 613 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 STARD13Q9Y3M8 1113 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 HS3ST4Q9Y661 456 aa12.47□□□□□ -0.41
ZNF548-209ENST00000598895 EIF3CLB5ME19 914 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 H0Y626 953 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 I6L893 689 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 LMNAP02545 664 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 KRT3P12035 628 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 PDGFRAP16234 1089 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 RRM1P23921 792 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 SDC4P31431 198 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 IL12RB1P42701 662 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CXCR3P49682 368 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 ZBED6P86452 979 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 LMAN2Q12907 356 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CDH18Q13634 790 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 AUHQ13825 339 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CCDC14Q49A88 953 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 FBXL22Q6P050 247 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 DNAJC24Q6P3W2 148 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CEP68Q76N32 757 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CCDC117Q8IWD4 279 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 ZNF366Q8N895 744 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 MDGA1Q8NFP4 955 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 IGSF8Q969P0 613 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 NT5C3BQ969T7 300 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 RPRD1AQ96P16 312 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 MCEEQ96PE7 176 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 EIF3CQ99613 913 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 PRMT1Q99873 361 aaKnown RBP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
ZNF548-209ENST00000598895 EDEM3Q9BZQ6 932 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 SLC6A17Q9H1V8 727 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 EPC1Q9H2F5 836 aa12.46□□□□□ -0.41
ZNF548-209ENST00000598895 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms