RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ERVW-1Q9UQF0 538 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 SLCO1B1Q9Y6L6 691 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 APC2O95996 2303 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 COL5A1P20908 1838 aaPredicted RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 A0A1W2PP55 124 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 EIF4E1BA6NMX2 242 aaKnown RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 PIK3R2O00459 728 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 MED7O43513 233 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 MAGEC1O60732 1142 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 ITGAVP06756 1048 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 GOT1P17174 413 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 CD38P28907 300 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 SLC8A1P32418 973 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 NUDT1P36639 197 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 MEA1Q16626 185 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 PITRM1Q5JRX3 1037 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 C9orf64Q5T6V5 341 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 TTC39BQ5VTQ0 682 aaPredicted RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 HNRNPLLQ8WVV9 542 aaKnown RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 BTN2A3PQ96KV6 586 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 FCRL2Q96LA5 508 aaPredicted RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 PRICKLE1Q96MT3 831 aaPredicted RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 ORAI3Q9BRQ5 295 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 NEUROG2Q9H2A3 272 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 ITIH6Q6UXX5 1313 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 URB1O60287 2271 aaKnown RBP17.6■□□□□ 0.41
PNKP-210ENST00000597965 NBEAQ8NFP9 2946 aa17.6■□□□□ 0.41
PNKP-210ENST00000597965 BICDL2A1A5D9 508 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 KCNK3O14649 394 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 MID1O15344 667 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 GNA14O95837 355 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 SLC2A3P11169 496 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
PNKP-210ENST00000597965 PMS1P54277 932 aaKnown RBP17.59■□□□□ 0.41
PNKP-210ENST00000597965 RPS24P62847 133 aaKnown RBP17.59■□□□□ 0.41
PNKP-210ENST00000597965 CYP4F3Q08477 520 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 ELAVL3Q14576 367 aaKnown RBP17.59■□□□□ 0.41
PNKP-210ENST00000597965 CCDC157Q569K6 752 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 C6orf118Q5T5N4 469 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 NADSYN1Q6IA69 706 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 FOXR2Q6PJQ5 311 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 LAYNQ6UX15 382 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 DSG4Q86SJ6 1040 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 DQX1Q8TE96 717 aaKnown RBP17.59■□□□□ 0.41
PNKP-210ENST00000597965 NXPE2Q96DL1 559 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 SLC39A13Q96H72 371 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 MRGPRX3Q96LB0 322 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 MED15Q96RN5 788 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 KDM4CQ9H3R0 1056 aa17.59■□□□□ 0.41
PNKP-210ENST00000597965 ITPR1Q14643 2758 aa17.58■□□□□ 0.41
PNKP-210ENST00000597965 KNTC1P50748 2209 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 A0A087WV48 116 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 TRIM49BA6NDI0 452 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 F5H5T6 163 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 ENC1O14682 589 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 LDOC1O95751 146 aaPredicted RBP17.58■□□□□ 0.4
PNKP-210ENST00000597965 RPL34P49207 117 aaKnown RBP17.58■□□□□ 0.4
PNKP-210ENST00000597965 IL9RQ01113 521 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 CAMK2BQ13554 666 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 DCAF6Q58WW2 860 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 DHRS13Q6UX07 377 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 ATP6V0D2Q8N8Y2 350 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 OR14C36Q8NHC7 312 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 CLEC4CQ8WTT0 213 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 SERAC1Q96JX3 654 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 FAM81BQ96LP2 452 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 SLC6A18Q96N87 628 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 NUCKS1Q9H1E3 243 aaKnown RBP17.58■□□□□ 0.4
PNKP-210ENST00000597965 ERVMER34-1Q9H9K5 563 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
PNKP-210ENST00000597965 INTS6Q9UL03 887 aaKnown RBP17.58■□□□□ 0.4
PNKP-210ENST00000597965 NAALADL1Q9UQQ1 740 aa17.58■□□□□ 0.4
PNKP-210ENST00000597965 RNF225M0QZC1 329 aaPredicted RBP17.57■□□□□ 0.4
PNKP-210ENST00000597965 SLC7A4O43246 635 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 RFPL3O75679 317 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 GABBR2O75899 941 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 MOCS2O96007 188 aaPredicted RBP17.57■□□□□ 0.4
PNKP-210ENST00000597965 JUPP14923 745 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 GPD2P43304 727 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
PNKP-210ENST00000597965 OVGP1Q12889 678 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 ILKQ13418 452 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 FSCBQ5H9T9 825 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 KCNT1Q5JUK3 1230 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 RABGAP1LQ5R372 815 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 FAM46CQ5VWP2 391 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
PNKP-210ENST00000597965 CHSY1Q86X52 802 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 ELOA2Q8IYF1 753 aaPredicted RBP17.57■□□□□ 0.4
PNKP-210ENST00000597965 LGI2Q8N0V4 545 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 CFAP52Q8N1V2 620 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 LRIG1Q96JA1 1093 aa17.57■□□□□ 0.4
PNKP-210ENST00000597965 CNDP2Q96KP4 475 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms