RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ADAMTS9Q9P2N4 1935 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 A0A1W2PP55 124 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CER1O95813 267 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 VAV1P15498 845 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 ABCB4P21439 1286 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 MZF1P28698 734 aaPredicted RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CLCN1P35523 988 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 KRT9P35527 623 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 GGCXP38435 758 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 PSMD8P48556 350 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 AFF3P51826 1226 aaKnown RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CENPCQ03188 943 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 EIF4EBP2Q13542 120 aaPredicted RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CST6Q15828 149 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 DPCR1Q3MIW9 517 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 KCNT1Q5JUK3 1230 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 EFHC1Q5JVL4 640 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 RNF219Q5W0B1 726 aaPredicted RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 C11orf57Q6ZUT1 292 aaPredicted RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CCAR2Q8N163 923 aaKnown RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 STK40Q8N2I9 435 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 SLC2A13Q96QE2 648 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 PRMT1Q99873 361 aaKnown RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 NEUROG2Q9H2A3 272 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 SGK2Q9HBY8 427 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 PCDHGC3Q9UN70 934 aa17.59■□□□□ 0.41
CCDC9-202ENST00000595659 ASCC3Q8N3C0 2202 aaKnown RBP17.59■□□□□ 0.41
CCDC9-202ENST00000595659 KMT2BQ9UMN6 2715 aaPredicted RBP17.58■□□□□ 0.41
CCDC9-202ENST00000595659 GTPBP10A4D1E9 387 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 RNASEH1O60930 286 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 HSF2BPO75031 334 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 RNASEH2AO75792 299 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 SRPRAP08240 638 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 C7P10643 843 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 CD27P26842 260 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 CCR1P32246 355 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 SLC8A1P32418 973 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 RDXP35241 583 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 IRAK1P51617 712 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 MAN2A1Q16706 1144 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 PTPN20Q4JDL3 420 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 VWA3BQ502W6 1294 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 KIAA0895LQ68EN5 471 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 FBXL22Q6P050 247 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 NCEH1Q6PIU2 408 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 IL27RAQ6UWB1 636 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 IGSF8Q969P0 613 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 NOX5Q96PH1 765 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 FAM129BQ96TA1 746 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 SYNCQ9H7C4 482 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 PCOLCE2Q9UKZ9 415 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 VANGL2Q9ULK5 521 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 ANKRD6Q9Y2G4 727 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 NEUROG3Q9Y4Z2 214 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 ZFHX4Q86UP3 3567 aa17.58■□□□□ 0.4
CCDC9-202ENST00000595659 MAP1BP46821 2468 aaKnown RBP17.58■□□□□ 0.4
CCDC9-202ENST00000595659 CACNA1BQ00975 2339 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 EDDM13A0A1B0GTR0 161 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 TARSL2A2RTX5 802 aaKnown RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 PES1O00541 588 aaKnown RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 CBFA2T3O75081 653 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 IGHV4-34P06331 123 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 GLI1P08151 1106 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 FTH1P19P0C7X4 201 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 GALCP54803 685 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 AUHQ13825 339 aaKnown RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 TEAD4Q15561 434 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 ZNF423Q2M1K9 1284 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 PRAMEF14Q5SWL7 426 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 OLFML1Q6UWY5 402 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 RAB44Q7Z6P3 723 aaPredicted RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 ADAT2Q7Z6V5 191 aaKnown RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 C14orf80Q86SX3 495 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 SLCO6A1Q86UG4 719 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 KDF1Q8NAX2 398 aaPredicted RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 RPRD1AQ96P16 312 aaPredicted RBP17.57■□□□□ 0.4
CCDC9-202ENST00000595659 OMDQ99983 421 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 ORAI3Q9BRQ5 295 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 SIK2Q9H0K1 926 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 MSRB2Q9Y3D2 182 aa17.57■□□□□ 0.4
CCDC9-202ENST00000595659 MUC22E2RYF6 1773 aaPredicted RBP17.56■□□□□ 0.4
CCDC9-202ENST00000595659 GOLGA8CPA6NN73 597 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 M0QYT0 321 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 PLK4O00444 970 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 TRIM16O95361 564 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 SLC2A3P11169 496 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 IL9RQ01113 521 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 RAPGEF1Q13905 1077 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 RABGAP1LQ5R372 815 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 TAF3Q5VWG9 929 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 CXorf57Q6NSI4 855 aaKnown RBP17.56■□□□□ 0.4
CCDC9-202ENST00000595659 DPY19L2P1Q6NXN4 242 aa17.56■□□□□ 0.4
CCDC9-202ENST00000595659 USP30Q70CQ3 517 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms