RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 TBC1D30Q9Y2I9 924 aa23.21■■□□□ 1.31
SNRNP70-204ENST00000595231 H0Y626 953 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 DGKGP49619 791 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 SIGLEC14Q08ET2 396 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 MMRN1Q13201 1228 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 DPYSQ14117 519 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 CXorf57Q6NSI4 855 aaKnown RBP23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 TFAP2DQ7Z6R9 452 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 TRIM58Q8NG06 486 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 FAM3CQ92520 227 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 CSPG4P5Q96PW8 444 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 RETREG1Q9H6L5 497 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 TMEM248Q9NWD8 314 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 SLC27A6Q9Y2P4 619 aa23.2■■□□□ 1.3
SNRNP70-204ENST00000595231 CCDC66A2RUB6 948 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 PI4K2BG5E9Z4 385 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 KRT81Q14533 505 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 PON2Q15165 354 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 TMEM196Q5HYL7 178 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 C1orf228Q6PIY5 440 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 KIAA0907Q7Z7F0 614 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 KATNAL2Q8IYT4 538 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ALG3Q92685 438 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 HES6Q96HZ4 224 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 PNKPQ96T60 521 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 RCOR3Q9P2K3 495 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 A0A0A0MRY4 1105 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 WASH4PA8MWX3 477 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 H3BRJ5 948 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 MAN2B1O00754 1011 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ALADP13716 330 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ARL4AP40617 200 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF177Q13360 481 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 CDH18Q13634 790 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ZFYVE27Q5T4F4 411 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF852Q6ZMS4 543 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ANKS1BQ7Z6G8 1248 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 MAP7D3Q8IWC1 876 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 SFTPA1Q8IWL2 248 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF687Q8N1G0 1237 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 C17orf53Q8N3J3 647 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 EZH1Q92800 747 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 SHDQ96IW2 340 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ALS2CR12Q96Q35 445 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 COL25A1Q9BXS0 654 aaPredicted RBP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 CALN1Q9BXU9 219 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 ABCB8Q9NUT2 735 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 TECTAO75443 2155 aa23.19■■□□□ 1.3
SNRNP70-204ENST00000595231 LRRD1A4D1F6 860 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 GOLGA6L9A6NEM1 432 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 FGF10O15520 208 aaPredicted RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 DDX3YO15523 660 aaKnown RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 KRT1P04264 644 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 ERCC2P18074 760 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 OR1E1P30953 314 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 CD70P32970 193 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 KDSRQ06136 332 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 LMAN2Q12907 356 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 GEN1Q17RS7 908 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 MEI1Q5TIA1 1274 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 GRAMD4Q6IC98 578 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 TRIM67Q6ZTA4 783 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 SETD3Q86TU7 594 aaPredicted RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.18■■□□□ 1.33e-7■□□□□ 9.3
SNRNP70-204ENST00000595231 RTL3Q8N8U3 475 aaKnown RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 RNF25Q96BH1 459 aaPredicted RBP23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 FAF2Q96CS3 445 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF670Q9BS34 389 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 CATSPERBQ9H7T0 1116 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 ARHGEF4Q9NR80 690 aa23.18■■□□□ 1.3
SNRNP70-204ENST00000595231 MIF4GDA9UHW6 222 aaKnown RBP23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 KAT7O95251 611 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 AMPD1P23109 780 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 ANKRD20A8PQ5CZ79 823 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 FSTL4Q6MZW2 842 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 VSIG1Q86XK7 387 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 ZNF557Q8N988 423 aaPredicted RBP23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 TERB1Q8NA31 727 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 PCDH19Q8TAB3 1148 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 UBE2Q2Q8WVN8 375 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 DNAI1Q9UI46 699 aa23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 INTS6Q9UL03 887 aaKnown RBP23.17■■□□□ 1.3
SNRNP70-204ENST00000595231 DCLK1O15075 740 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 DAPK3O43293 454 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 ZRANB2O95218 330 aaKnown RBP eCLIP23.16■■□□□ 1.35e-7■■■□□ 19.2
SNRNP70-204ENST00000595231 GRIA2P42262 883 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 MAPKAPK2P49137 400 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 TAZQ16635 292 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 TMEM215Q68D42 235 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 MFSD7Q6UXD7 560 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 CCDC117Q8IWD4 279 aaPredicted RBP23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 SUGP1Q8IWZ8 645 aaKnown RBP23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 EXD1Q8NHP7 514 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 TRIM44Q96DX7 344 aaPredicted RBP23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 ALG14Q96F25 216 aa23.16■■□□□ 1.3
SNRNP70-204ENST00000595231 KLC2Q9H0B6 622 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms