RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 KDM1BQ8NB78 822 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 LMLNQ96KR4 655 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 LGMNQ99538 433 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 CNGB3Q9NQW8 809 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 ERVW-1Q9UQF0 538 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 MAPK8IP1Q9UQF2 711 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 ATMQ13315 3056 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 MYLKQ15746 1914 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 EDDM13A0A1B0GTR0 161 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 TTC34A8MYJ7 566 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 ADH1BP00325 375 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 INSM1Q01101 510 aaPredicted RBP20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 ARID5BQ14865 1188 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 RNF219Q5W0B1 726 aaPredicted RBP20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 MSANTD2Q6P1R3 559 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 ERICH1Q86X53 443 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 CACTIN-AS1Q8N1I8 211 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 AADATQ8N5Z0 425 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 DCBLD1Q8N8Z6 715 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 MFSD2AQ8NA29 543 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 RFFLQ8WZ73 363 aa20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 CCDC47Q96A33 483 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 DDX50Q9BQ39 737 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 INTS6Q9UL03 887 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-216ENST00000592445 ERVH48-1M5A8F1 160 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 STX10O60499 249 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 MOCS3O95396 460 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 IL1BP01584 269 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 IGLV3-27P01718 113 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 MYL1P05976 194 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 SRPRAP08240 638 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 C5AR1P21730 350 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 CTSOP43234 321 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 TBX4P57082 545 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 DAOAP59103 153 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 RPS24P62847 133 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 KCNH2Q12809 1159 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 PITRM1Q5JRX3 1037 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 NAPEPLDQ6IQ20 393 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 KDM7AQ6ZMT4 941 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 MMS22LQ6ZRQ5 1243 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 PRPF39Q86UA1 669 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 STK40Q8N2I9 435 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 KCTD13Q8WZ19 329 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 NAF1Q96HR8 494 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 PRICKLE1Q96MT3 831 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 FAM129BQ96TA1 746 aa20.33■□□□□ 0.85
PRKCSH-216ENST00000592445 PIK3R2O00459 728 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 MAGEC1O60732 1142 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 SDC3O75056 442 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 SETSIPP0DME0 302 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 ACP1P24666 158 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 PPP2CBP62714 309 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 PPP2CAP67775 309 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 ECT2LQ008S8 904 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 E2F1Q01094 437 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 BROXQ5VW32 411 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 NADSYN1Q6IA69 706 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 PCSK4Q6UW60 755 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 KANSL1Q7Z3B3 1105 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 SPATS2Q86XZ4 545 aaKnown RBP20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 ZNF248Q8NDW4 579 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 AZIN2Q96A70 460 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 SLCO3A1Q9UIG8 710 aa20.32■□□□□ 0.84
PRKCSH-216ENST00000592445 C10orf142B7Z368 130 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 MT-CO3P00414 261 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 MAT2AP31153 395 aaKnown RBP20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 RGS7P49802 495 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 FSCBQ5H9T9 825 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 CFAP52Q8N1V2 620 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 SCML4Q8N228 414 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 USP25Q9UHP3 1055 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
PRKCSH-216ENST00000592445 K7ELQ4 463 aaPredicted RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 LATO43561 262 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 SIGLEC6O43699 453 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 LUC7L3O95232 432 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 VDRP11473 427 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 MZF1P28698 734 aaPredicted RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 PCBP4P57723 403 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 YWHAEP62258 255 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 DAB2P98082 770 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 CUL2Q13617 745 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 STAT4Q14765 748 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 PROX2Q3B8N5 592 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 HS1BP3Q53T59 392 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 IQCHQ86VS3 1027 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 IRGQQ8WZA9 623 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 MYEOVQ96EZ4 313 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 EEF2KMTQ96G04 330 aa20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 RPL10LQ96L21 214 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 NUCKS1Q9H1E3 243 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-216ENST00000592445 ITIH6Q6UXX5 1313 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 MAST4O15021 2626 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 A0A1B0GVL5 298 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 O00370 1275 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 LTFP02788 710 aa20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-216ENST00000592445 PFKFB1P16118 471 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms