RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 SPTBN4Q9H254 2564 aa11.89□□□□□ -0.51
VMP1-211ENST00000591315 MUC22E2RYF6 1773 aaPredicted RBP11.89□□□□□ -0.51
VMP1-211ENST00000591315 CEP250Q9BV73 2442 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 GABRG2P18507 467 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 BCKDHBP21953 392 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 HNRNPH3P31942 346 aaKnown RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 ZNF143P52747 638 aaPredicted RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 NRLP54845 237 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 GFPT1Q06210 699 aaPredicted RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 C5orf22Q49AR2 442 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 PITRM1Q5JRX3 1037 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 SCYL2Q6P3W7 929 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 DCUN1D2Q6PH85 259 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 TFAP2DQ7Z6R9 452 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 CACUL1Q86Y37 369 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 PYROXD2Q8N2H3 581 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 CAMKK1Q8N5S9 505 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 OR8K1Q8NGG5 319 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 ALG14Q96F25 216 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 MYO19Q96H55 970 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 VCPIP1Q96JH7 1222 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 BTBD6Q96KE9 485 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 MRGPRX3Q96LB0 322 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 FAM126AQ9BYI3 521 aaPredicted RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
VMP1-211ENST00000591315 GPATCH2LQ9NWQ4 482 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 THADAQ6YHU6 1953 aa11.88□□□□□ -0.51
VMP1-211ENST00000591315 NUP205Q92621 2012 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 TMEM191CA6NGB0 347 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 DRGXA6NNA5 263 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 E9PAM4 449 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 GFRA3O60609 400 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 MFAP3LO75121 409 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 TCF4P15884 667 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 POLR2EP19388 210 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 NDUFV2P19404 249 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 STK19P49842 368 aaPredicted RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 ZNF75DP51815 510 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 ENPP2Q13822 863 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 SIM2Q14190 667 aaPredicted RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 ASTE1Q2TB18 679 aaPredicted RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 HSF5Q4G112 596 aaPredicted RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 RABGAP1LQ5R372 815 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 ZC3H14Q6PJT7 736 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 STRADAQ7RTN6 431 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 KBTBD6Q86V97 674 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 AHI1Q8N157 1196 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 IQCDQ96DY2 449 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 RPL10LQ96L21 214 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 PEBP4Q96S96 227 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 CNPY3Q9BT09 278 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 PACSIN1Q9BY11 444 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 THAP2Q9H0W7 228 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 KIAA1522Q9P206 1035 aaPredicted RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 EBF1Q9UH73 591 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 SLCO3A1Q9UIG8 710 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 SMG5Q9UPR3 1016 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
VMP1-211ENST00000591315 RALGAPA1Q6GYQ0 2036 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 KNL1Q8NG31 2342 aa11.87□□□□□ -0.51
VMP1-211ENST00000591315 IGLV3-10A0A075B6K4 115 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 A0A1B0GVM2 712 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 TCAF2A6NFQ2 919 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 TTC34A8MYJ7 566 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 SNAP91O60641 907 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 RPP40O75818 363 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 EPHX1P07099 455 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 DLDP09622 509 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 VAV1P15498 845 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 PSMA2P25787 234 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 GALCP54803 685 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 ZNF177Q13360 481 aaPredicted RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 EIF4HQ15056 248 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 CA9Q16790 459 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 PLEKHG6Q3KR16 790 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 MANEALQ5VSG8 457 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 SDE2Q6IQ49 451 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms