RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CIR1Q86X95 450 aaPredicted RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 C17orf53Q8N3J3 647 aaPredicted RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 PHTF2Q8N3S3 785 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
APOC1-206ENST00000590334 RBM41Q96IZ5 413 aaKnown RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 LMLNQ96KR4 655 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 TLR10Q9BXR5 811 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 CATSPERBQ9H7T0 1116 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 PLK2Q9NYY3 685 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 MPP6Q9NZW5 540 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 STIM2Q9P246 746 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 MUTYHQ9UIF7 546 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 PIAS3Q9Y6X2 628 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 A0A0A0MRY4 1105 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 LRRD1A4D1F6 860 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 DCLK1O15075 740 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 TULP3O75386 442 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 TNNT1P13805 278 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ERCC2P18074 760 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 PTPN7P35236 360 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 CDKN2BP42772 138 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 SOX9P48436 509 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 MAPKAPK2P49137 400 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 OXCT1P55809 520 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ZXDAP98168 799 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ZNF177Q13360 481 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 SLC12A1Q13621 1099 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 FSCBQ5H9T9 825 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 RWDD4Q6NW29 188 aaKnown RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 MFSD7Q6UXD7 560 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ZNF783Q6ZMS7 281 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 SPOCD1Q6ZMY3 1216 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 MFN1Q8IWA4 741 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 SLC35F6Q8N357 371 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 CARNMT1Q8N4J0 409 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 NAT16Q8N8M0 369 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 RTL3Q8N8U3 475 aaKnown RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 PCDH19Q8TAB3 1148 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 TTC8Q8TAM2 541 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 BHMTQ93088 406 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 RNF157Q96PX1 679 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ARHGEF4Q9NR80 690 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
APOC1-206ENST00000590334 DEC1Q9P2X7 70 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 EFR3BQ9Y2G0 817 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 NUP205Q92621 2012 aa12.4□□□□□ -0.42
APOC1-206ENST00000590334 ILVBLA1L0T0 632 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 H0Y626 953 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 DAPK3O43293 454 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 PYGMP11217 842 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 HLA-FP30511 346 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 OR1E1P30953 314 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 SLC6A11P48066 632 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 DGKGP49619 791 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 PLK1P53350 603 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 STARD6P59095 220 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 CDH18Q13634 790 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 PPP2R5EQ16537 467 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 AFMIDQ63HM1 303 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 SLC9A4Q6AI14 798 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 TXNDC11Q6PKC3 985 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 ANKS1BQ7Z6G8 1248 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 TFAP2DQ7Z6R9 452 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 CCDC117Q8IWD4 279 aaPredicted RBP12.39□□□□□ -0.43
APOC1-206ENST00000590334 UMODL1-AS1Q8N2C9 162 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 LZTR1Q8N653 840 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 EDAQ92838 391 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
APOC1-206ENST00000590334 ALG14Q96F25 216 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 PNKPQ96T60 521 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 CARD9Q9H257 536 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 NDFIP2Q9NV92 336 aa12.39□□□□□ -0.43
APOC1-206ENST00000590334 KIAA1522Q9P206 1035 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms