RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PPP1R9BQ96SB3 815 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 BAG1Q99933 345 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 ZYG11BQ9C0D3 744 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 C2orf42Q9NWW7 574 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 MPP6Q9NZW5 540 aa21.94■■□□□ 1.1
ATG4D-212ENST00000590096 PPARGC1AQ9UBK2 798 aaKnown RBP21.94■■□□□ 1.1
ATG4D-212ENST00000590096 SOWAHDA6NJG2 315 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 CACNA1HO95180 2353 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 LCA5LO95447 670 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 ATP5BP06576 529 aaKnown RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 CHRM1P11229 460 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 HNRNPLP14866 589 aaKnown RBP eCLIP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 NTSR1P30989 418 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 PCK1P35558 622 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 GSDMDP57764 484 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 TCF15Q12870 199 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 SLC12A1Q13621 1099 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 FUT11Q495W5 492 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 ALFQ53S48 1182 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 ERMARDQ5T6L9 678 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 TMEM215Q68D42 235 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 RWDD4Q6NW29 188 aaKnown RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 ADIPOR2Q86V24 386 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 RHOT2Q8IXI1 618 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 MAML2Q8IZL2 1156 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 ARFGAP1Q8N6T3 406 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 NIPA2Q8N8Q9 360 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 TBC1D31Q96DN5 1066 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 LMLNQ96KR4 655 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 EPAS1Q99814 870 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 THAP10Q9P2Z0 257 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 USP18Q9UMW8 372 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 AP4E1Q9UPM8 1137 aa21.93■■□□□ 1.1
ATG4D-212ENST00000590096 EPN1Q9Y6I3 576 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-212ENST00000590096 EIF3CLB5ME19 914 aaKnown RBP21.92■■□□□ 1.1
ATG4D-212ENST00000590096 H0Y858 1186 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 SGK1O00141 431 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 LRIG2O94898 1065 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 L1CAMP32004 1257 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 CSKP41240 450 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 ZNF528Q3MIS6 628 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 PITRM1Q5JRX3 1037 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 CXorf57Q6NSI4 855 aaKnown RBP21.92■■□□□ 1.1
ATG4D-212ENST00000590096 TSSK4Q6SA08 328 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 TFAP2DQ7Z6R9 452 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 SLC35G2Q8TBE7 412 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 RFFLQ8WZ73 363 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 EIF3CQ99613 913 aaKnown RBP21.92■■□□□ 1.1
ATG4D-212ENST00000590096 HCN2Q9UL51 889 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 PLA2G4CQ9UP65 541 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 DOCK4Q8N1I0 1966 aa21.92■■□□□ 1.1
ATG4D-212ENST00000590096 FAM72CH0Y354 149 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 CREB3O43889 395 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 NDUFA10O95299 355 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 ASLP04424 464 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 RHOCP08134 193 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 SP9P0CG40 484 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 OR1E1P30953 314 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 WASP42768 502 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 PLEKHG6Q3KR16 790 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 C6orf118Q5T5N4 469 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 FAM72AQ5TYM5 149 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 MANEALQ5VSG8 457 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 FAM72DQ6L9T8 149 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 SETD3Q86TU7 594 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-212ENST00000590096 FAM72BQ86X60 149 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 PYROXD2Q8N2H3 581 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 CAMKK1Q8N5S9 505 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 TSTD1Q8NFU3 115 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 SORCS1Q8WY21 1168 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 TTC17Q96AE7 1141 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 PEBP4Q96S96 227 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 ACOX2Q99424 681 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 SNRNP25Q9BV90 132 aaKnown RBP21.91■■□□□ 1.1
ATG4D-212ENST00000590096 MAGEB5Q9BZ81 275 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 MUC3BQ9H195 1237 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 DHX35Q9H5Z1 703 aaKnown RBP21.91■■□□□ 1.1
ATG4D-212ENST00000590096 RETREG1Q9H6L5 497 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 POLMQ9NP87 494 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-212ENST00000590096 OSGEPQ9NPF4 335 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 POLR3BQ9NW08 1133 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-212ENST00000590096 GPATCH2LQ9NWQ4 482 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 CACNA2D2Q9NY47 1150 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 TBC1D30Q9Y2I9 924 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 PCDHA13Q9Y5I0 950 aa21.91■■□□□ 1.1
ATG4D-212ENST00000590096 K7ESF4 209 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 ADAM23O75077 832 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 PROSCO94903 275 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 DLDP09622 509 aaKnown RBP21.9■■□□□ 1.1
ATG4D-212ENST00000590096 HOXB2P14652 356 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 RHOQP17081 205 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 SSR1P43307 286 aaKnown RBP21.9■■□□□ 1.1
ATG4D-212ENST00000590096 DGKEP52429 567 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 NRLP54845 237 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 ZNF234Q14588 700 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 CRY1Q16526 586 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 FNDC3BQ53EP0 1204 aaKnown RBP21.9■■□□□ 1.1
ATG4D-212ENST00000590096 DAB2IPQ5VWQ8 1189 aa21.9■■□□□ 1.1
ATG4D-212ENST00000590096 PSTKQ8IV42 348 aaKnown RBP21.9■■□□□ 1.1
ATG4D-212ENST00000590096 CYB5D2Q8WUJ1 264 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms