RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 IGHV1OR15-9A0A0B4J2B8 117 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 H0Y626 953 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.782e-21■■■■■ 29.2
PTPN2-208ENST00000589216 CCP110O43303 1012 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 GYPCP04921 128 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 DLDP09622 509 aaKnown RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 SLC2A3P11169 496 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 SKILP12757 684 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RRM1P23921 792 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RDXP35241 583 aaKnown RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RFC1P35251 1148 aaPredicted RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 MPLP40238 635 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 PRKCIP41743 596 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 HDAC4P56524 1084 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RPL7AP62424 266 aaKnown RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 OGDHQ02218 1023 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 STARD3Q14849 445 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 SKOR2Q2VWA4 1001 aaPredicted RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 PLEKHG6Q3KR16 790 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 USP39Q53GS9 565 aaKnown RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 BRMS1LQ5PSV4 323 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RABGAP1LQ5R372 815 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 ARCQ7LC44 396 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 TMEFF1Q8IYR6 380 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 CCDC185Q8N715 623 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RNF214Q8ND24 703 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 C3orf20Q8ND61 904 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 UCMAQ8WVF2 138 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 TTC17Q96AE7 1141 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 ALG14Q96F25 216 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 MCEEQ96PE7 176 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 TRIM7Q9C029 511 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 XPO4Q9C0E2 1151 aaKnown RBP10.18□□□□□ -0.78
PTPN2-208ENST00000589216 HAUS4Q9H6D7 363 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 RRN3Q9NYV6 651 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 ZNF212Q9UDV6 495 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 USP18Q9UMW8 372 aa10.18□□□□□ -0.78
PTPN2-208ENST00000589216 CNOT1A5YKK6 2376 aaKnown RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PLXNA2O75051 1894 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 CACNA1EQ15878 2313 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PATE3B3GLJ2 98 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 E9PAM4 449 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FAM72CH0Y354 149 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 NPC1O15118 1278 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 GDF9O60383 454 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 ENDOD1O94919 500 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 CALB1P05937 261 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PLEKP08567 350 aaPredicted RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 VAV1P15498 845 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 POLR2EP19388 210 aaKnown RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 SDC4P31431 198 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PTPN9P43378 593 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 UBASH3AP57075 661 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 ZNF252P-AS1Q0IIN9 211 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 CAMK2GQ13555 558 aaPredicted RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 ELF2Q15723 593 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 C5orf22Q49AR2 442 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FIGNQ5HY92 759 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PLA2G2CQ5R387 149 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FAM72AQ5TYM5 149 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 MANEALQ5VSG8 457 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 TTC39BQ5VTQ0 682 aaPredicted RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 SFMBT2Q5VUG0 894 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 HGSNATQ68CP4 663 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 SDE2Q6IQ49 451 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FAM72DQ6L9T8 149 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 DNAJC24Q6P3W2 148 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 WDR59Q6PJI9 974 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 PRR23CQ6ZRP0 262 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 TFAP2DQ7Z6R9 452 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FAM72BQ86X60 149 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 MCOLN2Q8IZK6 566 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 DEFB119Q8N690 84 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 FAM172AQ8WUF8 416 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 RMDN1Q96DB5 314 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 SPACA7Q96KW9 195 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 RPL10LQ96L21 214 aaKnown RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 AIPL1Q9NZN9 384 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 MPP6Q9NZW5 540 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 USP36Q9P275 1121 aaKnown RBP10.17□□□□□ -0.78
PTPN2-208ENST00000589216 SLC12A6Q9UHW9 1150 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 OR51B4Q9Y5P0 310 aa10.17□□□□□ -0.78
PTPN2-208ENST00000589216 ITIH6Q6UXX5 1313 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 IGLV3-10A0A075B6K4 115 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 BCLAF3A2AJT9 711 aaKnown RBP10.16□□□□□ -0.78
PTPN2-208ENST00000589216 TTC34A8MYJ7 566 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 SIN3BO75182 1162 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 CAVIN2O95810 425 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 F9P00740 461 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 KRT3P12035 628 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 GPD1P21695 349 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 DHPSP49366 369 aaPredicted RBP10.16□□□□□ -0.78
PTPN2-208ENST00000589216 TPM4P67936 248 aa10.16□□□□□ -0.78
PTPN2-208ENST00000589216 CREB5Q02930 508 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms