RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ANTXRLA6NF34 631 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 FAM170BA6NMN3 283 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 KRT7P08729 469 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 TNNT1P13805 278 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 DRD1P21728 446 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 EPHB2P29323 1055 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 CD70P32970 193 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 GRIA2P42262 883 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 TPI1P60174 286 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 LMAN2Q12907 356 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 CCINQ13939 588 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 IFI16Q16666 785 aaKnown RBP19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF662Q6ZS27 426 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 POLNQ7Z5Q5 900 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 CCDC117Q8IWD4 279 aaPredicted RBP19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 OR52K2Q8NGK3 314 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 PCDH18Q9HCL0 1135 aa19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 RBM12Q9NTZ6 932 aaKnown RBP19.53■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 EEF2KO00418 725 aaKnown RBP19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 CHRNB1P11230 501 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 RHOQP17081 205 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 GOT1P17174 413 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF177Q13360 481 aaPredicted RBP19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 ANKS1BQ7Z6G8 1248 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 NLRP14Q86W24 1093 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 CCDC105Q8IYK2 499 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 ZNF557Q8N988 423 aaPredicted RBP19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 LMLNQ96KR4 655 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 C11orf16Q9NQ32 467 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 GGA2Q9UJY4 613 aa19.52■□□□□ 0.72
CLPTM1-209ENST00000588855 CHD5Q8TDI0 1954 aa19.52■□□□□ 0.71
CLPTM1-209ENST00000588855 TBC1D3BA6NDS4 549 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PRRT4C9JH25 899 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 K7EQS6 105 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PALMO75781 387 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 CD48P09326 243 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PABPC1P11940 636 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 NUMBP49757 651 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 ARSEP51690 589 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 CDH6P55285 790 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 FZD5Q13467 585 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 KRT81Q14533 505 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PREPLQ4J6C6 727 aaPredicted RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 RHOT1Q8IXI2 618 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 RNF10Q8N5U6 811 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PBXIP1Q96AQ6 731 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 NELL2Q99435 816 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 NDFIP2Q9NV92 336 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 TMEM248Q9NWD8 314 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 CWC15Q9P013 229 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 PYCARDQ9ULZ3 195 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 TBC1D30Q9Y2I9 924 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 ZDBF2Q9HCK1 2354 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 MYO18AQ92614 2054 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 A0A0A0MRY4 1105 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 OR1E1P30953 314 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 HTR7P34969 479 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 CSKP41240 450 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 SEC13P55735 322 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 FUT11Q495W5 492 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 ZFYVE27Q5T4F4 411 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 LRRC38Q5VT99 294 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 TMEM215Q68D42 235 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 RFX8Q6ZV50 586 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 KIAA0907Q7Z7F0 614 aaPredicted RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 RTL3Q8N8U3 475 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 FAM71BQ8TC56 605 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 OSBPL6Q9BZF3 934 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 LMAN1LQ9HAT1 526 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 KIAA1522Q9P206 1035 aaPredicted RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 INTS6Q9UL03 887 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 SIT1Q9Y3P8 196 aa19.51■□□□□ 0.71
CLPTM1-209ENST00000588855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■□□□□ 8.8
CLPTM1-209ENST00000588855 MUC22E2RYF6 1773 aaPredicted RBP19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 H3BRJ5 948 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 FGF10O15520 208 aaPredicted RBP19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 PSTPIP1O43586 416 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 PI15O43692 258 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 DCNP07585 359 aaKnown RBP19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 RHOCP08134 193 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 MZF1P28698 734 aaPredicted RBP19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 ARL4AP40617 200 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 MARCKSL1P49006 195 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 ZNF135P52742 658 aaPredicted RBP19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 MMRN1Q13201 1228 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 DPYSQ14117 519 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 LRRC32Q14392 662 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 DGKKQ5KSL6 1271 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 Q6ZS52 159 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 BMP8AQ7Z5Y6 402 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 AHI1Q8N157 1196 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 WFIKKN2Q8TEU8 576 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 RAPGEF5Q92565 580 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 TSC1Q92574 1164 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 KRT35Q92764 455 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 CSPG4P5Q96PW8 444 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 CATSPERBQ9H7T0 1116 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms