RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 SEC14L1Q92503 715 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 HAUS1Q96CS2 278 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 FCRL2Q96LA5 508 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 RPP25Q9BUL9 199 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 FAM129AQ9BZQ8 928 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 ARFGAP3Q9NP61 516 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 LSM7Q9UK45 103 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 DNPEPQ9ULA0 475 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 NUMBLQ9Y6R0 609 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 LOC730098B7Z3J9 87 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 DAPK3O43293 454 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 CREB3O43889 395 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 ECI2O75521 394 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 ZNF189O75820 626 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 KCNJ1P48048 391 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 HARS2P49590 506 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 CLCN6P51797 869 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 USP4Q13107 963 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 HTR4Q13639 388 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 OASLQ15646 514 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 NUGGCQ68CJ6 796 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 VITQ6UXI7 678 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 PYROXD2Q8N2H3 581 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 ATP6V0D2Q8N8Y2 350 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 RSAD2Q8WXG1 361 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 TRIM51Q9BSJ1 452 aa18.38■□□□□ 0.53
RBFOX1-222ENST00000585867 E2F8A0AVK6 867 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 NDC80O14777 642 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 KLKB1P03952 638 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 ZP2Q05996 745 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 XRCC4Q13426 336 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 DUPD1Q68J44 220 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 RFX8Q6ZV50 586 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 DENND1CQ8IV53 801 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 MFSD6LQ8IWD5 586 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 CCDC89Q8N998 374 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 ARHGEF4Q9NR80 690 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 OR12D3Q9UGF7 316 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
RBFOX1-222ENST00000585867 CFAP69A5D8W1 941 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 GREM1O60565 184 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 PSMC3P17980 439 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 CORO1AP31146 461 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 NRG1Q02297 640 aaPredicted RBP18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 DPYSQ14117 519 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 C1orf228Q6PIY5 440 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 ALLCQ8N6M5 410 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 CASKIN2Q8WXE0 1202 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 IFT81Q8WYA0 676 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 NXPE3Q969Y0 559 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 KCNK12Q9HB15 430 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 TMPRSS4Q9NRS4 437 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 IGSF9Q9P2J2 1179 aa18.36■□□□□ 0.53
RBFOX1-222ENST00000585867 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 MOCS2O96007 188 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 PECAM1P16284 738 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 AMPD1P23109 780 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 SERPINB6P35237 376 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 GRM2Q14416 872 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 HLTFQ14527 1009 aaKnown RBP eCLIP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 NCBP2-AS2Q69YL0 99 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 EMBQ6PCB8 327 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 Q6ZNB5 142 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 YAF2Q8IY57 180 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 BBOF1Q8ND07 529 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 DEPDC1BQ8WUY9 529 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 BTN2A3PQ96KV6 586 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 C1orf74Q96LT6 269 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 FAM118BQ9BPY3 351 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 THG1LQ9NWX6 298 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 ASIC3Q9UHC3 531 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 AGO1Q9UL18 857 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 HEY1Q9Y5J3 304 aa18.35■□□□□ 0.53
RBFOX1-222ENST00000585867 ESYT3A0FGR9 886 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 HACD1B0YJ81 288 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 SGK1O00141 431 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 FGF10O15520 208 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 PAGE1O75459 146 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 RBP3P10745 1247 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 PAFAH1B3Q15102 231 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 BBS7Q8IWZ6 715 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 KIAA1958Q8N8K9 716 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 AZIN2Q96A70 460 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 TRMT61BQ9BVS5 477 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 DPH5Q9H2P9 285 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 LINC00597Q9H2U6 94 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 CATSPERBQ9H7T0 1116 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 PCDH9Q9HC56 1237 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 TBC1D14Q9P2M4 693 aa18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 SAE1Q9UBE0 346 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-222ENST00000585867 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms