RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 SELENOOQ9BVL4 669 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 SIK2Q9H0K1 926 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 HAUS4Q9H6D7 363 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 SEPT11Q9NVA2 429 aaKnown RBP14.41□□□□□ -0.1
GGA3-215ENST00000582821 VANGL2Q9ULK5 521 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 INVSQ9Y283 1065 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 TBC1D30Q9Y2I9 924 aa14.41□□□□□ -0.1
GGA3-215ENST00000582821 MUC22E2RYF6 1773 aaPredicted RBP14.41□□□□□ -0.1
GGA3-215ENST00000582821 IGLV3-10A0A075B6K4 115 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 FAM170AA1A519 330 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 FOXD2O60548 495 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 EPHX1P07099 455 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 SRPRAP08240 638 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 BCKDHBP21953 392 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 RFC1P35251 1148 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 VASPP50552 380 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 ATXN1P54253 815 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 CDH4P55283 916 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 SULT2A1Q06520 285 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 NFKBIBQ15653 356 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 PITRM1Q5JRX3 1037 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 PLA2G2CQ5R387 149 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 PPP1R15BQ5SWA1 713 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 ARTNQ5T4W7 220 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 CXorf57Q6NSI4 855 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 WDR59Q6PJI9 974 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 SLC36A4Q6YBV0 504 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 ZNF571Q7Z3V5 609 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 PHLDB2Q86SQ0 1253 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 TMPRSS6Q8IU80 811 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 MRGPRX3Q96LB0 322 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 MKRN2Q9H000 416 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 FBRSQ9HAH7 460 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 PRDM16Q9HAZ2 1276 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 PARD6AQ9NPB6 346 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 MBD1Q9UIS9 605 aaPredicted RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 CAPN11Q9UMQ6 739 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
GGA3-215ENST00000582821 LAMA1P25391 3075 aa14.4□□□□□ -0.1
GGA3-215ENST00000582821 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.39□□□□□ -0.11
GGA3-215ENST00000582821 IGHV1OR15-9A0A0B4J2B8 117 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
GGA3-215ENST00000582821 ZNF806P0C7X5 589 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 HLA-EP13747 358 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ADRA1BP35368 520 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 COPAP53621 1224 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ATP11AP98196 1134 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 NRG1Q02297 640 aaPredicted RBP14.39□□□□□ -0.11
GGA3-215ENST00000582821 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 SPEM2Q0P670 501 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ZNF177Q13360 481 aaPredicted RBP14.39□□□□□ -0.11
GGA3-215ENST00000582821 LRRC31Q6UY01 552 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 APCDD1Q8J025 514 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 FRMD1Q8N878 549 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 OR2T3Q8NH03 318 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ALG14Q96F25 216 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 OSBPL2Q9H1P3 480 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ARRDC1-AS1Q9H2J1 176 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 TSPY26PQ9H489 355 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 RETREG1Q9H6L5 497 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 PRSS16Q9NQE7 514 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ITM2CQ9NQX7 267 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 SEMA4GQ9NTN9 838 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 TAS2R14Q9NYV8 317 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 IFNKQ9P0W0 207 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 USP36Q9P275 1121 aaKnown RBP14.39□□□□□ -0.11
GGA3-215ENST00000582821 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 ITIH6Q6UXX5 1313 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 DCHS1Q96JQ0 3298 aa14.39□□□□□ -0.11
GGA3-215ENST00000582821 NUMA1Q14980 2115 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 PRR5-ARHGAP8B1AHC4 643 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 DDX3XO00571 662 aaKnown RBP eCLIP14.38□□□□□ -0.11
GGA3-215ENST00000582821 MAP3K13O43283 966 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 GJB6O95452 261 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 IGLV3-19P01714 112 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 TPM3P06753 285 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 GPD1P21695 349 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 MZF1P28698 734 aaPredicted RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 IRAK1P51617 712 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 ZNF143P52747 638 aaPredicted RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 ST8SIA6P61647 398 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 ARHGAP8P85298 464 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 ZBED6P86452 979 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 LMNB2Q03252 620 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 ARL13BQ3SXY8 428 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 SH3PXD2AQ5TCZ1 1133 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 PLEKHA7Q6IQ23 1121 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 DNAJC24Q6P3W2 148 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 SETD3Q86TU7 594 aaPredicted RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 CIR1Q86X95 450 aaPredicted RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 FAM131BQ86XD5 332 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 PRCCQ92733 491 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms