RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 HLA-FP30511 346 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 L1CAMP32004 1257 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TIE1P35590 1138 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 PLK1P53350 603 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 GALCP54803 685 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 SEC13P55735 322 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 GSDMDP57764 484 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 KRT83P78385 493 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 GAS6Q14393 721 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 SPA17Q15506 151 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 CRY1Q16526 586 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 C15orf59Q2T9L4 293 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 ASTE1Q2TB18 679 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 BOLA3Q53S33 107 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 C6orf118Q5T5N4 469 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 RNF219Q5W0B1 726 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 MBLAC2Q68D91 279 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 NAIF1Q69YI7 327 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TRNP1Q6NT89 227 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 SCYL2Q6P3W7 929 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 CCAR2Q8N163 923 aaKnown RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 ALLCQ8N6M5 410 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 NIPA2Q8N8Q9 360 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TC2NQ8N9U0 490 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TSTD1Q8NFU3 115 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 EZH1Q92800 747 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 NELL1Q92832 810 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 CIPCQ9C0C6 399 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 THAP2Q9H0W7 228 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 THAP10Q9P2Z0 257 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 MYO1AQ9UBC5 1043 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 SUN2Q9UH99 717 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 XPO7Q9UIA9 1087 aaKnown RBP10.74□□□□□ -0.69
TOP3A-212ENST00000582122 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 TBC1D30Q9Y2I9 924 aa10.74□□□□□ -0.69
TOP3A-212ENST00000582122 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 PRRT4C9JH25 899 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 FGF10O15520 208 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 AP5Z1O43299 807 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 ARHGAP25P42331 645 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 MAPKAPK2P49137 400 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 SATB1Q01826 763 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 SFSWAPQ12872 951 aaKnown RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 ENPP2Q13822 863 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 HADHQ16836 314 aaKnown RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 GEN1Q17RS7 908 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 PLEKHG6Q3KR16 790 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 DGLUCYQ7Z3D6 616 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 WDR5BQ86VZ2 330 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 MAML2Q8IZL2 1156 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 CFAP52Q8N1V2 620 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 TXNDC5Q8NBS9 432 aaKnown RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 ZBTB44Q8NCP5 570 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 TBC1D31Q96DN5 1066 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 GABRG3Q99928 467 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 NUP85Q9BW27 656 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 CATSPERBQ9H7T0 1116 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 CALCOCO1Q9P1Z2 691 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 CTTNBP2NLQ9P2B4 639 aa10.73□□□□□ -0.69
TOP3A-212ENST00000582122 MYO18AQ92614 2054 aaKnown RBP10.73□□□□□ -0.69
TOP3A-212ENST00000582122 ILVBLA1L0T0 632 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 K7ESF4 209 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 AXIN1O15169 862 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 NRDCO43847 1150 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 SRGAP2O75044 1071 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 GJB6O95452 261 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 HOXB2P14652 356 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 RHOQP17081 205 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 FECHP22830 423 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 OR1E1P30953 314 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 CSKP41240 450 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 SGSHP51688 502 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 GEMIN4P57678 1058 aaKnown RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ECT2LQ008S8 904 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 SLC20A2Q08357 652 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 MESP2Q0VG99 397 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 LMAN2Q12907 356 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ZNF234Q14588 700 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 TCEAL1Q15170 157 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 FNDC3BQ53EP0 1204 aaKnown RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 USP39Q53GS9 565 aaKnown RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 PITRM1Q5JRX3 1037 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ERMARDQ5T6L9 678 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 EGFLAMQ63HQ2 1017 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 RWDD4Q6NW29 188 aaKnown RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 SERPINA13PQ6UXR4 307 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ADIPOR2Q86V24 386 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ZNF683Q8IZ20 524 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 CCDC33Q8N5R6 958 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 ZNF564Q8TBZ8 553 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-212ENST00000582122 TEKT4Q8WW24 435 aa10.72□□□□□ -0.69
TOP3A-212ENST00000582122 IGSF8Q969P0 613 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms