RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ABHD2P08910 425 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 SLCO1A2P46721 670 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 GLUD2P49448 558 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 MAGOHP61326 146 aaKnown RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 CREMQ03060 361 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 NR1H3Q13133 447 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PPP2R5DQ14738 602 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 KLHL38Q2WGJ6 581 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 TTMPQ5BVD1 217 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 RTP2Q5QGT7 225 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 TPGS2Q68CL5 300 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 CES5AQ6NT32 575 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 TMEM184AQ6ZMB5 413 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 RNF19BQ6ZMZ0 732 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 BNIPLQ7Z465 357 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ZNF354CQ86Y25 554 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 RELL1Q8IUW5 271 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 GLIS1Q8NBF1 620 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PDZD8Q8NEN9 1154 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 CCDC110Q8TBZ0 833 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 GIPC2Q8TF65 315 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 NSMCE1Q8WV22 266 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 CPT1BQ92523 772 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PGM2Q96G03 612 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 CEP295NLQ96MC4 621 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ZNF512Q96ME7 567 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 SELENOSQ9BQE4 189 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ZBP1Q9H171 429 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 USP29Q9HBJ7 922 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ETNK1Q9HBU6 452 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 TMEM30AQ9NV96 361 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ETNK2Q9NVF9 386 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 CLIC5Q9NZA1 410 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 DTLQ9NZJ0 730 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 MARCH2Q9P0N8 246 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 GMIPQ9P107 970 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 KLHL8Q9P2G9 620 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 TLR6Q9Y2C9 796 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 BACE2Q9Y5Z0 518 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 NFS1Q9Y697 457 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 A0A0A0MRY4 1105 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SLC12A8A0AV02 714 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 C2orf71A6NGG8 1288 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 POC1B-GALNT4F8VUJ3 575 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 DFFAO00273 331 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 PRRG1O14668 218 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 MFSD11O43934 449 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TBX10O75333 385 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 PAGE1O75459 146 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SPAG6O75602 509 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CPP00450 1065 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SOD2P04179 222 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SHBGP04278 402 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ADH1AP07327 375 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CSH1P0DML2 217 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CSH2P0DML3 217 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 IL9P15248 144 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TSHRP16473 764 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 LTBRP36941 435 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 GPR15P49685 360 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TUBP50607 506 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 PPP2R2AP63151 447 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CDK16Q00536 496 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TAF10Q12962 218 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 DPYSQ14117 519 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TRIP4Q15650 581 aaPredicted RBP9.54□□□□□ -0.88
SS18-220ENST00000582092 SMAD2Q15796 467 aaKnown RBP9.54□□□□□ -0.88
SS18-220ENST00000582092 LONRF1Q17RB8 773 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CCDC38Q502W7 563 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ANKRD20A2Q5SQ80 823 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ANKRD20A1Q5TYW2 823 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ANKRD20A3Q5VUR7 823 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 KDM7AQ6ZMT4 941 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CAPN12Q6ZSI9 719 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 C3orf62Q6ZUJ4 267 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TAS1R1Q7RTX1 841 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CCDC13Q8IYE1 715 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 GJD3Q8N144 294 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SH2D3CQ8N5H7 860 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 NAT8LQ8N9F0 302 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 GPR152Q8TDT2 470 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 RTP4Q96DX8 246 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 FCRL2Q96LA5 508 aaPredicted RBP9.54□□□□□ -0.88
SS18-220ENST00000582092 PWWP2AQ96N64 755 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 SPATA13Q96N96 652 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 VAT1Q99536 393 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 C1QTNF1Q9BXJ1 281 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 MAGEB5Q9BZ81 275 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CYP4F11Q9HBI6 524 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 XAB2Q9HCS7 855 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms