RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 MIS18BP1Q6P0N0 1132 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PRSS55Q6UWB4 352 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 MTSS1LQ765P7 747 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 NIPA1Q7RTP0 329 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 CATIPQ7Z7H3 387 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PLA2G4DQ86XP0 818 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 CMTM4Q8IZR5 234 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 CLRN3Q8NCR9 226 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 OR14C36Q8NHC7 312 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PPP1R14CQ8TAE6 165 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 RSPH1Q8WYR4 309 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 ACAP3Q96P50 834 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 MAP7D2Q96T17 732 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 SH2D3AQ9BRG2 576 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 ARRDC1-AS1Q9H2J1 176 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 MINDY3Q9H8M7 445 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 RSAD1Q9HA92 442 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 RIC8AQ9NPQ8 531 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 TOPORSQ9NS56 1045 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 DNMT3BQ9UBC3 853 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 CACNG4Q9UBN1 327 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 STK39Q9UEW8 545 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 DPP7Q9UHL4 492 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 FBXW11Q9UKB1 542 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 RAB23Q9ULC3 237 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PIN4Q9Y237 131 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 GIT1Q9Y2X7 761 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PCDHA10Q9Y5I2 948 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 THADAQ6YHU6 1953 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 PTPRDP23468 1912 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 ADAMTS9Q9P2N4 1935 aa7.05□□□□□ -1.28
PPP4R1-216ENST00000580283 MYO16Q9Y6X6 1858 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ARID2Q68CP9 1835 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ARL5CA6NH57 179 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 CCL16O15467 120 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 MTSS1O43312 755 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ECI2O75521 394 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 LY86O95711 162 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 OR1G1P47890 313 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 TMPRSS15P98073 1019 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 UGT8Q16880 541 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 CT83Q5H943 113 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 RAB11FIP4Q86YS3 637 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 MB21D2Q8IYB1 491 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 AFAP1L2Q8N4X5 818 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 PIK3C3Q8NEB9 887 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 GJA10Q969M2 543 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 LENG9Q96B70 501 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 MCRS1Q96EZ8 462 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 PAAF1Q9BRP4 392 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 GCOM2Q9BZD3 368 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 VPS11Q9H270 941 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ING3Q9NXR8 418 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 SEC63Q9UGP8 760 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 PRSS50Q9UI38 385 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 SSX2IPQ9Y2D8 614 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 SH3BP1Q9Y3L3 701 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 ASXL3Q9C0F0 2248 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 CACNA1EQ15878 2313 aa7.04□□□□□ -1.28
PPP4R1-216ENST00000580283 LPLP06858 475 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 CYP3A4P08684 503 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 ACRV1P26436 265 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 CXCL12P48061 93 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 RAB27AP51159 221 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 PRKCEQ02156 737 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 SPIDRQ14159 915 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 STAT4Q14765 748 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 ELAVL1Q15717 326 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 USP41Q3LFD5 358 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 AASDHQ4L235 1098 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 FKBP15Q5T1M5 1219 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 TCEAL6Q6IPX3 200 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 FUT10Q6P4F1 479 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 HEATR3Q7Z4Q2 680 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 GSPT2Q8IYD1 628 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 GPR65Q8IYL9 337 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 CTCFLQ8NI51 663 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 LNX1Q8TBB1 728 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 URGCPQ8TCY9 931 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 EXTL1Q92935 676 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 TCEAL3Q969E4 200 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 PGBD4Q96DM1 585 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 BBC3Q96PG8 261 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 FAM193BQ96PV7 902 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 GAD1Q99259 594 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 LZTS2Q9BRK4 669 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 ZNF577Q9BSK1 485 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 SCNM1Q9BWG6 230 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 EIF2AQ9BY44 585 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 CXCL16Q9H2A7 254 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 KCTD10Q9H3F6 313 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 NRBP2Q9NSY0 501 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 TBC1D22BQ9NU19 505 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 AGPAT5Q9NUQ2 364 aa7.03□□□□□ -1.28
PPP4R1-216ENST00000580283 TMPRSS11EQ9UL52 423 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms