RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CHSY1Q86X52 802 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 YAF2Q8IY57 180 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 PYROXD2Q8N2H3 581 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 PRELID2Q8N945 189 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 PCDH19Q8TAB3 1148 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 RIN3Q8TB24 985 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 DEPDC1BQ8WUY9 529 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 DDX47Q9H0S4 455 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ARHGEF4Q9NR80 690 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 IGSF9Q9P2J2 1179 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ZNF148Q9UQR1 794 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 HS3ST4Q9Y661 456 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 HACD1B0YJ81 288 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 E9PAM4 449 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 H7C0C1 242 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 SCAMP3O14828 347 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 CTIFO43310 598 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ITGAVP06756 1048 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ASGR2P07307 311 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ERCC2P18074 760 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 STIP1P31948 543 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 CHKAP35790 457 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ATP5OP48047 213 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 AUHQ13825 339 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 DPYSQ14117 519 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 PDK1Q15118 436 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 PPP1R7Q15435 360 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 SIX1Q15475 284 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 MS4A13Q5J8X5 152 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ADGRF1Q5T601 910 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 LRRC49Q8IUZ0 686 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 CDKL3Q8IVW4 592 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 MFSD6LQ8IWD5 586 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 PLD5Q8N7P1 536 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 KIAA1958Q8N8K9 716 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 C1orf54Q8WWF1 131 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 SLCO2A1Q92959 643 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 NKD2Q969F2 451 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 RPP25Q9BUL9 199 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 KCNK12Q9HB15 430 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 THG1LQ9NWX6 298 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 HEY1Q9Y5J3 304 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 SHROOM3Q8TF72 1996 aa14.33□□□□□ -0.12
CSNK1D-209ENST00000578904 TCRBV7S2A1N4TA0A589 114 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 E2F8A0AVK6 867 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 MTSS1O43312 755 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 LIASO43766 372 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 STK10O94804 968 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 RHOQP17081 205 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 PSMC3P17980 439 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 TACR2P21452 398 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 HOXC13P31276 330 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 IFNAR2P48551 515 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 VCPP55072 806 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 SNX1Q13596 522 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 NOMO1Q15155 1222 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 RAP1GAP2Q684P5 730 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 DARS2Q6PI48 645 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 IFT20Q8IY31 132 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 PQLC3Q8N755 202 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 NOA1Q8NC60 698 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 WBP2Q969T9 261 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 LRRC3BQ96PB8 259 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 TRMT61BQ9BVS5 477 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 TMPRSS4Q9NRS4 437 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 AMACRQ9UHK6 382 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 VANGL2Q9ULK5 521 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 WNT6Q9Y6F9 365 aa14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 TCF20Q9UGU0 1960 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-209ENST00000578904 IGLV3-10A0A075B6K4 115 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 UQCRHLA0A096LP55 91 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 WASH4PA8MWX3 477 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 SGK1O00141 431 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 DCLK1O15075 740 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 CYBBP04839 570 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 UQCRHP07919 91 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 RHOXF2BP0C7M4 288 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 RBP3P10745 1247 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 GDI1P31150 447 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 MAPKAPK2P49137 400 aa14.31□□□□□ -0.12
CSNK1D-209ENST00000578904 ZNF33AQ06730 810 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms