RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ARID5AQ03989 594 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 TMEM215Q68D42 235 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 OR6B2Q6IFH4 312 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 GLRX5Q86SX6 157 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 ERICH1Q86X53 443 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 MSANTD4Q8NCY6 345 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 SETD7Q8WTS6 366 aaKnown RBP16.6■□□□□ 0.25
VAPA-204ENST00000577901 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 ASNSD1Q9NWL6 643 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 CACNA1GO43497 2377 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 A0A1W2PQC6 194 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 MSI1O43347 362 aaKnown RBP16.59■□□□□ 0.25
VAPA-204ENST00000577901 HSF2BPO75031 334 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 CER1O95813 267 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 LATS1O95835 1130 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 MMEP08473 750 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 ZNF883P0CG24 379 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 MATKP42679 507 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 TBX4P57082 545 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 BNC1Q01954 994 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 NR1I3Q14994 352 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 PTPN20Q4JDL3 420 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 NUGGCQ68CJ6 796 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 IL27RAQ6UWB1 636 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 CCNI2Q6ZMN8 369 aaPredicted RBP16.59■□□□□ 0.25
VAPA-204ENST00000577901 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 DQX1Q8TE96 717 aaKnown RBP16.59■□□□□ 0.25
VAPA-204ENST00000577901 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 TM7SF3Q9NS93 570 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 TJP2Q9UDY2 1190 aa16.59■□□□□ 0.25
VAPA-204ENST00000577901 EIF2B4Q9UI10 523 aaKnown RBP16.59■□□□□ 0.25
VAPA-204ENST00000577901 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
VAPA-204ENST00000577901 ERBB2P04626 1255 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 SLC11A2P49281 568 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 ZNF445P59923 1031 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 SLC6A3Q01959 620 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 NNTQ13423 1086 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 HLA-BQ31612 363 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 MPPE1Q53F39 396 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 DCAF6Q58WW2 860 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 SYPL2Q5VXT5 272 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 TRIM72Q6ZMU5 477 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 FAM183BPQ6ZVS7 135 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
VAPA-204ENST00000577901 PCED1AQ9H1Q7 454 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 TLR6Q9Y2C9 796 aa16.58■□□□□ 0.24
VAPA-204ENST00000577901 FNDC3AQ9Y2H6 1198 aaKnown RBP16.58■□□□□ 0.24
VAPA-204ENST00000577901 TSPAN3O60637 253 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 IGLV3-27P01718 113 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 HLA-EP13747 358 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 FERP16591 822 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 GABRB2P47870 512 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 UBASH3AP57075 661 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 CDK17Q00537 523 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 FANCCQ00597 558 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 CAMK2GQ13555 558 aaPredicted RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 TAF5Q15542 800 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 FNDC3BQ53EP0 1204 aaKnown RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 OLFML1Q6UWY5 402 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 DEFB106AQ8N104 65 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 SLC20A1Q8WUM9 679 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 SNX19Q92543 992 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 AZIN2Q96A70 460 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 DDX50Q9BQ39 737 aaKnown RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 CCDC86Q9H6F5 360 aaKnown RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 KIAA1522Q9P206 1035 aaPredicted RBP16.57■□□□□ 0.24
VAPA-204ENST00000577901 STOML2Q9UJZ1 356 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 GPSM3Q9Y4H4 160 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 ATRXP46100 2492 aa16.57■□□□□ 0.24
VAPA-204ENST00000577901 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 GRAP2O75791 330 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 TRUB2O95900 331 aaKnown RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 CYP1A1P04798 512 aaPredicted RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 HLA-FP30511 346 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 CSNK1EP49674 416 aaKnown RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 AFF3P51826 1226 aaKnown RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 NOMO3P69849 1222 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 ACAP1Q15027 740 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 NAA35Q5VZE5 725 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 C19orf48Q6RUI8 117 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 SLC26A9Q7LBE3 791 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 TAC4Q86UU9 113 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 ZNF397Q8NF99 534 aaPredicted RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 BAHD1Q8TBE0 780 aaPredicted RBP16.56■□□□□ 0.24
VAPA-204ENST00000577901 ADAM32Q8TC27 787 aa16.56■□□□□ 0.24
VAPA-204ENST00000577901 RHBDD1Q8TEB9 315 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms