RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 FAM46CQ5VWP2 391 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 DSG4Q86SJ6 1040 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 FAM186BQ8IYM0 893 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 KIAA0895Q8NCT3 520 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 EDEM1Q92611 657 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 CCDC47Q96A33 483 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 GRAMD1AQ96CP6 724 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 MYO19Q96H55 970 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 LMLNQ96KR4 655 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 USP29Q9HBJ7 922 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 STIM2Q9P246 746 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 CEP83Q9Y592 693 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
SMG6-218ENST00000575454 ANAPC1Q9H1A4 1944 aa9.33□□□□□ -0.92
SMG6-218ENST00000575454 ANK1P16157 1881 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 MYH11P35749 1972 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 TEP1Q99973 2627 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 YJEFN3A6XGL0 299 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 E7ENQ6 273 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 PRAMEF26H0Y7S4 382 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 WNT9AO14904 365 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SIGLEC6O43699 453 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 KLRC4O43908 158 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 IL1BP01584 269 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 IGLV3-27P01718 113 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 GP1BAP07359 652 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 TRIM49P0CI25 452 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 TRIM49CP0CI26 452 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SETSIPP0DME0 302 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 ALPPL2P10696 532 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 ME1P48163 572 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 PSMD8P48556 350 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 TBX4P57082 545 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 YWHAEP62258 255 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 ECT2LQ008S8 904 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SULT2A1Q06520 285 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 PPP3CAQ08209 521 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 VAC14Q08AM6 782 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 FAM133BQ5BKY9 247 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 ARHGAP40Q5TG30 622 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 MSANTD2Q6P1R3 559 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 RFWD3Q6PCD5 774 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 KDM7AQ6ZMT4 941 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 BHLHA9Q7RTU4 235 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 KANSL1Q7Z3B3 1105 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SPATS2Q86XZ4 545 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 CARNMT1Q8N4J0 409 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 FBXL13Q8NEE6 735 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 KCNE4Q8WWG9 221 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 IRGQQ8WZA9 623 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 CCDC97Q96F63 343 aaPredicted RBP9.32□□□□□ -0.92
SMG6-218ENST00000575454 SPAG5Q96R06 1193 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 ABCG4Q9H172 646 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 MTG2Q9H4K7 406 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 POLR1BQ9H9Y6 1135 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 RAB20Q9NX57 234 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 TSPAN16Q9UKR8 245 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 ERVW-1Q9UQF0 538 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 KNTC1P50748 2209 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 KNL1Q8NG31 2342 aa9.32□□□□□ -0.92
SMG6-218ENST00000575454 ITIH6Q6UXX5 1313 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 TCHHQ07283 1943 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 NEMP2A6NFY4 417 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 TTC34A8MYJ7 566 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 TRIM38O00635 465 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 ARHGAP6O43182 974 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 KLK10O43240 276 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MSI1O43347 362 aaKnown RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 OPA1O60313 960 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 VDRP11473 427 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 CKMT1AP12532 417 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MZF1P28698 734 aaPredicted RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 MXI1P50539 228 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 DUSP3P51452 185 aaPredicted RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 SGSHP51688 502 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 OXCT1P55809 520 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 GABREP78334 506 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 CCDC15Q0P6D6 951 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 NNTQ13423 1086 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 ADAM9Q13443 819 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 SLC12A1Q13621 1099 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
SMG6-218ENST00000575454 PITRM1Q5JRX3 1037 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 CDCP2Q5VXM1 449 aa9.31□□□□□ -0.92
SMG6-218ENST00000575454 RESP18Q5W5W9 173 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms