RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SAR1BQ9Y6B6 198 aa10.97□□□□□ -0.65
LITAF-216ENST00000574848 CEP192Q8TEP8 1941 aa10.97□□□□□ -0.65
LITAF-216ENST00000574848 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 NYNRINQ9P2P1 1898 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 A0A087X0T9 212 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 A0A0A6YYK5 440 aaPredicted RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 LNP1A1A4G5 178 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TIMM44O43615 452 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 IGLV3-19P01714 112 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 H2AFZP0C0S5 128 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 FAM228BP0C875 321 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 PRLRP16471 622 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TCP1P17987 556 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 TNFAIP3P21580 790 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 SGSHP51688 502 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 ZNF234Q14588 700 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 STARD3Q14849 445 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 ARHGAP44Q17R89 818 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 FUT11Q495W5 492 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 SYPL2Q5VXT5 272 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 PAPD7Q5XG87 772 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 NADSYN1Q6IA69 706 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TCEAL6Q6IPX3 200 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 ALKBH5Q6P6C2 394 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 H2AFVQ71UI9 128 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 ZNF571Q7Z3V5 609 aaPredicted RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 ADIPOR2Q86V24 386 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 AHI1Q8N157 1196 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 WDTC1Q8N5D0 677 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 FRMD1Q8N878 549 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 HJURPQ8NCD3 748 aaPredicted RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 UBE2Q2Q8WVN8 375 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TCEAL3Q969E4 200 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 FAM149B1Q96BN6 582 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TMA16Q96EY4 203 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 LMLNQ96KR4 655 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 SLC2A13Q96QE2 648 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 CPXM1Q96SM3 734 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 EDEM2Q9BV94 578 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 CARD6Q9BX69 1037 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 LACRTQ9GZZ8 138 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 TMEM245Q9H330 911 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 SMOC1Q9H4F8 434 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 USP36Q9P275 1121 aaKnown RBP10.96□□□□□ -0.65
LITAF-216ENST00000574848 GGA2Q9UJY4 613 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 NAALADL1Q9UQQ1 740 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 RAD54BQ9Y620 910 aa10.96□□□□□ -0.65
LITAF-216ENST00000574848 SDK1Q7Z5N4 2213 aa10.96□□□□□ -0.66
LITAF-216ENST00000574848 A0A0U1RQJ8 604 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CTAGE15A4D2H0 777 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 WASH3PC4AMC7 463 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 ZBTB24O43167 697 aaPredicted RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 TSPAN3O60637 253 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 TUBBP07437 444 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CTAGE8P0CG41 777 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 PABPC1P11940 636 aaKnown RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 PRKCHP24723 683 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CDH5P33151 784 aaPredicted RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 PTGER3P43115 390 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 DHPSP49366 369 aaPredicted RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 COPAP53621 1224 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 BPIFB4P59827 614 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 YWHAZP63104 245 aaKnown RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 CAMK2GQ13555 558 aaPredicted RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 STPG1Q5TH74 334 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 LYSMD4Q5XG99 296 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 OLFML1Q6UWY5 402 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CTAGE6Q86UF2 777 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 SYT12Q8IV01 421 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CTAGE4Q8IX94 777 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 SYCE1Q8N0S2 351 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 PGBD3Q8N328 593 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 WFDC5Q8TCV5 224 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 CTNNBL1Q8WYA6 563 aaPredicted RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
LITAF-216ENST00000574848 FBRSQ9HAH7 460 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 ABCB8Q9NUT2 735 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 TJP2Q9UDY2 1190 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 TRIM10Q9UDY6 481 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 HYOU1Q9Y4L1 999 aa10.95□□□□□ -0.66
LITAF-216ENST00000574848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 GOLGA6L7A0A1B0GV03 622 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 DCDC2BA2VCK2 349 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 FOXN3O00409 490 aaPredicted RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 KHNYNO15037 678 aaKnown RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 FANCGO15287 622 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 HSF2BPO75031 334 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 MOCS3O95396 460 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 TRUB2O95900 331 aaKnown RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 APOEP02649 317 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SCNN1AP37088 669 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 USP8P40818 1118 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 RPL6Q02878 288 aaKnown RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 PTPRNQ16849 979 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms