RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KIR2DL1P43626 348 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 NRLP54845 237 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 GSDMDP57764 484 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 OGDHQ02218 1023 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 SCAPQ12770 1279 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ZNF177Q13360 481 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 DMC1Q14565 340 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 SPA17Q15506 151 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 EFHC2Q5JST6 749 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 EOGTQ5NDL2 527 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 SDE2Q6IQ49 451 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 TSSK4Q6SA08 328 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 Q6ZS52 159 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 KIAA0907Q7Z7F0 614 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 RHOT2Q8IXI1 618 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 CCAR2Q8N163 923 aaKnown RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 CFAP52Q8N1V2 620 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ZNF513Q8N8E2 541 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 SPC24Q8NBT2 197 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 EZH1Q92800 747 aaPredicted RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 P2RY11Q96G91 374 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ANLNQ9NQW6 1124 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ABCB8Q9NUT2 735 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 SPTLC3Q9NUV7 552 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ELOVL2Q9NXB9 296 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 CTTNBP2NLQ9P2B4 639 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 PPARGC1AQ9UBK2 798 aaKnown RBP11.37□□□□□ -0.59
CHD3-216ENST00000573936 OR12D3Q9UGF7 316 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 GGA2Q9UJY4 613 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 FZD10Q9ULW2 581 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 SLC8A2Q9UPR5 921 aa11.37□□□□□ -0.59
CHD3-216ENST00000573936 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 IGLV3-10A0A075B6K4 115 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 DCDC2BA2VCK2 349 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 EIF3CLB5ME19 914 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 PRRT4C9JH25 899 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 PRPSAP2O60256 369 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 LCA5LO95447 670 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 ATP5BP06576 529 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 POLR2EP19388 210 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 HLA-FP30511 346 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 HTR7P34969 479 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 MAGEA1P43355 309 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 MESP2Q0VG99 397 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 GAS6Q14393 721 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 GEN1Q17RS7 908 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 RAB6CQ53S08 254 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 C2orf27AQ580R0 203 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 ERMARDQ5T6L9 678 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 SYT13Q7L8C5 426 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 C14orf80Q86SX3 495 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 PSTKQ8IV42 348 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 ZNF683Q8IZ20 524 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 CCDC185Q8N715 623 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 IGSF8Q969P0 613 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 ARHGEF26Q96DR7 871 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 MYEOVQ96EZ4 313 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 EIF3CQ99613 913 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 BAG1Q99933 345 aaPredicted RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 RTKNQ9BST9 563 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 FAM126AQ9BYI3 521 aaPredicted RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 ZYG11BQ9C0D3 744 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 RAB6CQ9H0N0 254 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 PRMT8Q9NR22 394 aaPredicted RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 DONSONQ9NYP3 566 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 CLEC4EQ9ULY5 219 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
CHD3-216ENST00000573936 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
CHD3-216ENST00000573936 KMT2BQ9UMN6 2715 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 I6L893 689 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 KLF8O95600 359 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 ASLP04424 464 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 MIPP30301 263 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 NTSR1P30989 418 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 HOXA6P31267 233 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 L1CAMP32004 1257 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 ZNF135P52742 658 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 ZNF252P-AS1Q0IIN9 211 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 LMAN2Q12907 356 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 EMC10Q5UCC4 262 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 MBLAC2Q68D91 279 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 SETD3Q86TU7 594 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 TXLNBQ8N3L3 684 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 CAMKK1Q8N5S9 505 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 IL17RCQ8NAC3 791 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 TXNDC5Q8NBS9 432 aaKnown RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 TBC1D31Q96DN5 1066 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 LMLNQ96KR4 655 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 EPAS1Q99814 870 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms