RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 FAM149B1Q96BN6 582 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 NEUROG2Q9H2A3 272 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 ADAMTS1Q9UHI8 967 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 FASNP49327 2511 aaKnown RBP22.76■■□□□ 1.23
SNF8-216ENST00000573795 A0A1W2PPC4 97 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 GOLGA6L4A6NEF3 574 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 FAM47DPA6NHR8 397 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 VILLO15195 856 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 TNFSF14O43557 240 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 GRK6P43250 576 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 RACK1P63244 317 aaKnown RBP22.75■■□□□ 1.23
SNF8-216ENST00000573795 PITX1P78337 314 aaPredicted RBP22.75■■□□□ 1.23
SNF8-216ENST00000573795 KCNJ12Q14500 433 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 FOXR2Q6PJQ5 311 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 MMAAQ8IVH4 418 aaKnown RBP22.75■■□□□ 1.23
SNF8-216ENST00000573795 ELOA2Q8IYF1 753 aaPredicted RBP22.75■■□□□ 1.23
SNF8-216ENST00000573795 APCDD1Q8J025 514 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 NELFBQ8WX92 580 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 FAM129BQ96TA1 746 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 SLC4A5Q9BY07 1137 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 ST7Q9NRC1 585 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 SLCO3A1Q9UIG8 710 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 NCKAP1Q9Y2A7 1128 aa22.75■■□□□ 1.23
SNF8-216ENST00000573795 A0A1B0GTQ1 180 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 TYW5A2RUC4 315 aaKnown RBP22.74■■□□□ 1.23
SNF8-216ENST00000573795 WNT9AO14904 365 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 SRPRAP08240 638 aaKnown RBP22.74■■□□□ 1.23
SNF8-216ENST00000573795 CETN1Q12798 172 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 KCNH2Q12809 1159 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 EIF4EBP2Q13542 120 aaPredicted RBP22.74■■□□□ 1.23
SNF8-216ENST00000573795 CAMK2BQ13554 666 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 ZC3H12AQ5D1E8 599 aaKnown RBP22.74■■□□□ 1.23
SNF8-216ENST00000573795 RAP1GAP2Q684P5 730 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 LGI2Q8N0V4 545 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 AADATQ8N5Z0 425 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 GANCQ8TET4 914 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 INTS2Q9H0H0 1204 aaKnown RBP22.74■■□□□ 1.23
SNF8-216ENST00000573795 DKK4Q9UBT3 224 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 RAXQ9Y2V3 346 aa22.74■■□□□ 1.23
SNF8-216ENST00000573795 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 E5RJQ4 531 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 SART1O43290 800 aaKnown RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 TACR2P21452 398 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 PPP1R2P41236 205 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 MARSP56192 900 aaKnown RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 SHBQ15464 509 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 MEA1Q16626 185 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 COL28A1Q2UY09 1125 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 PRAMEF14Q5SWL7 426 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 ADAT2Q7Z6V5 191 aaKnown RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 OR2T34Q8NGX1 318 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 STK32AQ8WU08 396 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 PTPRN2Q92932 1015 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 ACE2Q9BYF1 805 aaPredicted RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 ACP6Q9NPH0 428 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 TJP2Q9UDY2 1190 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 HOOK1Q9UJC3 728 aaKnown RBP22.73■■□□□ 1.23
SNF8-216ENST00000573795 FZD4Q9ULV1 537 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 CTNND2Q9UQB3 1225 aa22.73■■□□□ 1.23
SNF8-216ENST00000573795 EDDM13A0A1B0GTR0 161 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 A0A1W2PR77 199 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 FAM149AA5PLN7 773 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 RNASEH1O60930 286 aaKnown RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 RNASEH2AO75792 299 aaKnown RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 SLC8A1P32418 973 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 ACADSBP45954 432 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 PSMD8P48556 350 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 NUMBP49757 651 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 STK19P49842 368 aaPredicted RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 ECT2LQ008S8 904 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 MORC3Q14149 939 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 SMAD1Q15797 465 aaKnown RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 TMEM110Q86TL2 294 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 CHSY1Q86X52 802 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 STK40Q8N2I9 435 aa22.72■■□□□ 1.23
SNF8-216ENST00000573795 RPL10LQ96L21 214 aaKnown RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 PRMT1Q99873 361 aaKnown RBP22.72■■□□□ 1.23
SNF8-216ENST00000573795 TRUB2O95900 331 aaKnown RBP22.71■■□□□ 1.23
SNF8-216ENST00000573795 APOEP02649 317 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 AFPP02771 609 aaKnown RBP22.71■■□□□ 1.23
SNF8-216ENST00000573795 KRT5P13647 590 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 VAV1P15498 845 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 ADPRHP54922 357 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 STX17P56962 302 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 TAF5Q15542 800 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 CIR1Q86X95 450 aaPredicted RBP22.71■■□□□ 1.23
SNF8-216ENST00000573795 GATAD2AQ86YP4 633 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 GALNT15Q8N3T1 639 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 ZNF606Q8WXB4 792 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 BTN2A3PQ96KV6 586 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 ELF4Q99607 663 aaPredicted RBP22.71■■□□□ 1.23
SNF8-216ENST00000573795 OMDQ99983 421 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 POPDC2Q9HBU9 364 aa22.71■■□□□ 1.23
SNF8-216ENST00000573795 TRABD2BA6NFA1 517 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 LRRC72A6NJI9 287 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 CAPN9O14815 690 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 DFNA5O60443 496 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 LETM1O95202 739 aaPredicted RBP22.7■■□□□ 1.22
SNF8-216ENST00000573795 MZF1P28698 734 aaPredicted RBP22.7■■□□□ 1.22
SNF8-216ENST00000573795 DRD3P35462 400 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms