RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 STOML2Q9UJZ1 356 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 DNAJC12Q9UKB3 198 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 SLC27A6Q9Y2P4 619 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 GPR179Q6PRD1 2367 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 ZNF292O60281 2723 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 GVINP1Q7Z2Y8 2422 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 TCRBV21S2A2A0A5A6 115 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 KCNJ18B7U540 433 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 WASH3PC4AMC7 463 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 GFRA2O00451 464 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 PES1O00541 588 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 CAPN9O14815 690 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 SART1O43290 800 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 MSI1O43347 362 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 TIMM44O43615 452 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 EPN2O95208 641 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 LATS1O95835 1130 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 FYNP06241 537 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 BMP4P12644 408 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 HOXB2P14652 356 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 KRT9P35527 623 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 SLC11A2P49281 568 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 TBX4P57082 545 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 ZNF445P59923 1031 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 YWHAZP63104 245 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 RING1Q06587 406 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 KCNJ12Q14500 433 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 E2F5Q15329 346 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 GEN1Q17RS7 908 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 MIIPQ5JXC2 388 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 EGFLAMQ63HQ2 1017 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 SASS6Q6UVJ0 657 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 PRR23CQ6ZRP0 262 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 ERMP1Q7Z2K6 904 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 WDTC1Q8N5D0 677 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 ENOX1Q8TC92 643 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 GPT2Q8TD30 523 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 UCMAQ8WVF2 138 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 HMGB4Q8WW32 186 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 RLN3Q8WXF3 142 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 AZIN2Q96A70 460 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 FAM149B1Q96BN6 582 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 PIWIL1Q96J94 861 aaKnown RBP7.73□□□□□ -1.17
NUP88-205ENST00000572809 BTBD6Q96KE9 485 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 SIX2Q9NPC8 291 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 IGSF5Q9NSI5 407 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 DLL3Q9NYJ7 618 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 CYTH4Q9UIA0 394 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 CLEC4EQ9ULY5 219 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 NAALADL1Q9UQQ1 740 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 PCDHGA5Q9Y5G8 931 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 VPS13AQ96RL7 3174 aa7.73□□□□□ -1.17
NUP88-205ENST00000572809 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 GOLGA6L7A0A1B0GV03 622 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 A0A1W2PQF6 199 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 BCLAF3A2AJT9 711 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 E5RJQ4 531 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 NPC1O15118 1278 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 PAPSS1O43252 624 aaPredicted RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 ACSL4O60488 711 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 CAVIN2O95810 425 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 IGLV3-27P01718 113 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 GABRG2P18507 467 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 EEF1GP26641 437 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 P2RY2P41231 377 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 ATXN1P54253 815 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 SNX16P57768 344 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 BPIFB4P59827 614 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 CREB5Q02930 508 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 CCDC6Q16204 474 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 EFHC2Q5JST6 749 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 EFHC1Q5JVL4 640 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 SYPL2Q5VXT5 272 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 NUGGCQ68CJ6 796 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 DPY19L2P1Q6NXN4 242 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 BEND5Q7L4P6 421 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 DGLUCYQ7Z3D6 616 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 ANKS1BQ7Z6G8 1248 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 FAM71AQ8IYT1 594 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 FRMD1Q8N878 549 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 DQX1Q8TE96 717 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 FBF1Q8TES7 1133 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 PPP1R13BQ96KQ4 1090 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 SPACA7Q96KW9 195 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 SERPINB11Q96P15 392 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 GABRG3Q99928 467 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 DDX50Q9BQ39 737 aaKnown RBP7.72□□□□□ -1.17
NUP88-205ENST00000572809 TRIM62Q9BVG3 475 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 LHX5Q9H2C1 402 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 POPDC2Q9HBU9 364 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 VPS45Q9NRW7 570 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 ELOVL2Q9NXB9 296 aa7.72□□□□□ -1.17
NUP88-205ENST00000572809 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms