RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 USP4Q13107 963 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MESDQ14696 234 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 SYPL2Q5VXT5 272 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 PEAR1Q5VY43 1037 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 RABEPKQ7Z6M1 372 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 DEFB106AQ8N104 65 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 ARHGAP18Q8N392 663 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 HDDC3Q8N4P3 179 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 ARFGAP1Q8N6T3 406 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MDGA1Q8NFP4 955 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 TRIM58Q8NG06 486 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 CENPIQ92674 756 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 FAM149B1Q96BN6 582 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 CFAP57Q96MR6 1250 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 WDR24Q96S15 920 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 NPY6RQ99463 290 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 TRIM62Q9BVG3 475 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 CLIC5Q9NZA1 410 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 IP6K2Q9UHH9 426 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MAGED2Q9UNF1 606 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 NAALADL1Q9UQQ1 740 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 IGSF10Q6WRI0 2623 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 ATG2BQ96BY7 2078 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 K7EQS6 105 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 CKMP06732 381 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 GPD1P21695 349 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 NOS2P35228 1153 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PSEN1P49768 467 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ATXN3P54252 364 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ETF1P62495 437 aaKnown RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PIGHQ14442 188 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 SLC25A52Q3SY17 297 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 C2orf27AQ580R0 203 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 DCAF6Q58WW2 860 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF569Q5MCW4 686 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 NAIF1Q69YI7 327 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 DAAM2Q86T65 1068 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 SLC35F6Q8N357 371 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF276Q8N554 614 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PDZD8Q8NEN9 1154 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 EDEM1Q92611 657 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 SLITRK1Q96PX8 696 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 POLMQ9NP87 494 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 TLR8Q9NR97 1041 aaKnown RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ABCC13Q9NSE7 274 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 CALCOCO1Q9P1Z2 691 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 SLC6A14Q9UN76 642 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ABCA7Q8IZY2 2146 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PCNX2A6NKB5 2137 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ENDOD1O94919 500 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 IGLV3-25P01717 112 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 NCAM1P13591 858 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PSMA2P25787 234 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 SDC4P31431 198 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 EIF2DP41214 584 aaKnown RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 MAPK8P45983 427 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 GNG11P61952 73 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 EIF4EBP2Q13542 120 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 C15orf59Q2T9L4 293 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 RAB6CQ53S08 254 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 NT5DC3Q86UY8 548 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 C16orf45Q96MC5 204 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-209ENST00000571558 TBCBQ99426 244 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 RAB6CQ9H0N0 254 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 RRN3Q9NYV6 651 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 PILRBQ9UKJ0 227 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ARHGAP26Q9UNA1 814 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 GPSM3Q9Y4H4 160 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 HYOU1Q9Y4L1 999 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 WNT6Q9Y6F9 365 aa14.24□□□□□ -0.13
RPAIN-209ENST00000571558 ASCC3Q8N3C0 2202 aaKnown RBP14.23□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF638Q14966 1978 aaKnown RBP14.23□□□□□ -0.13
RPAIN-209ENST00000571558 MYO16Q9Y6X6 1858 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 DENND4CQ5VZ89 1909 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 THADAQ6YHU6 1953 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 SPAARA0A1B0GVQ0 90 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 TMEM110-MUSTN1A8MSY1 372 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 LRCH4O75427 683 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 FTCDO95954 541 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 TCF4P15884 667 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 COMTP21964 271 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 SLC1A1P43005 524 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 PPP3CCP48454 512 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 HDAC4P56524 1084 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 SLC14A1Q13336 389 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 DUOXA1Q1HG43 343 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 LYSMD4Q5XG99 296 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 BTBD8Q5XKL5 378 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 STRADAQ7RTN6 431 aa14.23□□□□□ -0.13
RPAIN-209ENST00000571558 RAB44Q7Z6P3 723 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms