RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CHD8Q9HCK8 2581 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 GFPT2O94808 682 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 DNTTP04053 509 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 SRPRAP08240 638 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 C7P10643 843 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 KLK7P49862 253 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 SULT1E1P49888 294 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 NOVA1P51513 510 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 OXCT1P55809 520 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 POLR2FP61218 127 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 RPS14P62263 151 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 SLC12A1Q13621 1099 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 HNRNPA1L2Q32P51 320 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 OTUD1Q5VV17 481 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 PSAPL1Q6NUJ1 521 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 FBXL22Q6P050 247 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 SND1Q7KZF4 910 aaKnown RBP eCLIP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 CIR1Q86X95 450 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 ZNF677Q86XU0 584 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 XYLT1Q86Y38 959 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 CCAR2Q8N163 923 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 DNASE2BQ8WZ79 361 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 MYO19Q96H55 970 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 MRGPRX3Q96LB0 322 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 NPY6RQ99463 290 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 GTPBP2Q9BX10 602 aaKnown RBP14.9□□□□□ -0.02
CMTM3-215ENST00000568477 PCED1AQ9H1Q7 454 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 TSPY26PQ9H489 355 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 MTG2Q9H4K7 406 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 FSCN3Q9NQT6 498 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 ERVW-1Q9UQF0 538 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 PAXBP1Q9Y5B6 917 aa14.9□□□□□ -0.02
CMTM3-215ENST00000568477 NUMA1Q14980 2115 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 FAM170AA1A519 330 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 LGALS16A8MUM7 142 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 METTL12A8MUP2 240 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 ARHGAP33O14559 1287 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 RNASEH1O60930 286 aaKnown RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SIN3BO75182 1162 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 PAGE1O75459 146 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SYPP08247 313 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 MMEP08473 750 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 PDGFRAP16234 1089 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 MAOBP27338 520 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SOX5P35711 763 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 CTSOP43234 321 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 NOMO3P69849 1222 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 ECT2LQ008S8 904 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 CENPCQ03188 943 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 AUHQ13825 339 aaKnown RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 ARID5BQ14865 1188 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SYCP1Q15431 976 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 BRMS1LQ5PSV4 323 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 N4BP2L1Q5TBK1 243 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 DCAF12L1Q5VU92 463 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 NAA35Q5VZE5 725 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 HDDC3Q8N4P3 179 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 PCMTD1Q96MG8 357 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SPAG5Q96R06 1193 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 PPP1R9BQ96SB3 815 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 MIR1-1HGQ9H1L0 117 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 RSPH9Q9H1X1 276 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 NLRC4Q9NPP4 1024 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 PIGVQ9NUD9 493 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 LIMA1Q9UHB6 759 aaKnown RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 NOCTQ9UK39 431 aaKnown RBP14.89□□□□□ -0.03
CMTM3-215ENST00000568477 VANGL2Q9ULK5 521 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 SIK3Q9Y2K2 1263 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 HS3ST4Q9Y661 456 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 CEP295Q9C0D2 2601 aa14.89□□□□□ -0.03
CMTM3-215ENST00000568477 EDDM13A0A1B0GTR0 161 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 A0A1B0GTW7 788 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 GOLGA8SH3BPF8 625 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 EPHB6O15197 1021 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 F9P00740 461 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 TFE3P19532 575 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CSRP1P21291 193 aaKnown RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 GGCXP38435 758 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 NNMTP40261 264 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 STAT1P42224 750 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CXCR3P49682 368 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 JAM2P57087 298 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CDR2Q01850 454 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 DEUP1Q05D60 604 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SULT2A1Q06520 285 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SLC25A52Q3SY17 297 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CXorf57Q6NSI4 855 aaKnown RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 DHX40Q8IX18 779 aaKnown RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 ZCCHC9Q8N567 271 aaKnown RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 NEK11Q8NG66 645 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SLC20A1Q8WUM9 679 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 CPA5Q8WXQ8 436 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 IGSF8Q969P0 613 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 NT5C3BQ969T7 300 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms