RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 NDFIP2Q9NV92 336 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 KLHL11Q9NVR0 708 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CWC15Q9P013 229 aaKnown RBP18.53■□□□□ 0.56
COMMD4-222ENST00000568034 DEC1Q9P2X7 70 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 WASH4PA8MWX3 477 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 CREB3O43889 395 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 CLDN11O75508 207 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 KAT7O95251 611 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 EGFP01133 1207 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 KRT7P08729 469 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 CHRNB1P11230 501 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 RHOQP17081 205 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 GOT1P17174 413 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 IL4RP24394 825 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 HTR7P34969 479 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 MARCKSL1P49006 195 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 DPYSQ14117 519 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 IFI16Q16666 785 aaKnown RBP18.52■□□□□ 0.56
COMMD4-222ENST00000568034 PPP6R3Q5H9R7 873 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-222ENST00000568034 TMEM215Q68D42 235 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 TFAP2DQ7Z6R9 452 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 NT5DC3Q86UY8 548 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 SUGP1Q8IWZ8 645 aaKnown RBP18.52■□□□□ 0.56
COMMD4-222ENST00000568034 RAPGEF5Q92565 580 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 KRT35Q92764 455 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 C11orf16Q9NQ32 467 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 TMEM248Q9NWD8 314 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 INTS6Q9UL03 887 aaKnown RBP18.52■□□□□ 0.56
COMMD4-222ENST00000568034 HCN2Q9UL51 889 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 NDRG2Q9UN36 371 aaKnown RBP18.52■□□□□ 0.56
COMMD4-222ENST00000568034 TBC1D30Q9Y2I9 924 aa18.52■□□□□ 0.56
COMMD4-222ENST00000568034 CUL9Q8IWT3 2517 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 PRRT4C9JH25 899 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 K7EQS6 105 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 EEF2KO00418 725 aaKnown RBP18.51■□□□□ 0.55
COMMD4-222ENST00000568034 PSTPIP1O43586 416 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 EPHB2P29323 1055 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 GRIA2P42262 883 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 CDH6P55285 790 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 TPI1P60174 286 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 CDH18Q13634 790 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 DPYSL3Q14195 570 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 RWDD4Q6NW29 188 aaKnown RBP18.51■□□□□ 0.55
COMMD4-222ENST00000568034 RFX8Q6ZV50 586 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 RHOT1Q8IXI2 618 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 CCDC105Q8IYK2 499 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 PJA1Q8NG27 643 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 ALG14Q96F25 216 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 CSPG4P5Q96PW8 444 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 ABCB8Q9NUT2 735 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 GGA2Q9UJY4 613 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 OR51B4Q9Y5P0 310 aa18.51■□□□□ 0.55
COMMD4-222ENST00000568034 CHD5Q8TDI0 1954 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 C3orf70A6NLC5 250 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 USP27XA6NNY8 438 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 H0Y626 953 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 APODP05090 189 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 PABPC1P11940 636 aaKnown RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 DRD1P21728 446 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 CTNNA2P26232 953 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 CSKP41240 450 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 HCAR3P49019 387 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF135P52742 658 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 GRSF1Q12849 480 aaKnown RBP eCLIP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 MMRN1Q13201 1228 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF177Q13360 481 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 UBXN2BQ14CS0 331 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 FUT11Q495W5 492 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ANKS1BQ7Z6G8 1248 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ADIPOR2Q86V24 386 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 RTL3Q8N8U3 475 aaKnown RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF557Q8N988 423 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 KIAA1524Q8TCG1 905 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 FAF2Q96CS3 445 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 OSBPL6Q9BZF3 934 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 KLC2Q9H0B6 622 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 RETREG1Q9H6L5 497 aa18.5■□□□□ 0.55
COMMD4-222ENST00000568034 NOL6Q9H6R4 1146 aaKnown RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 RCOR3Q9P2K3 495 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 MRPS17Q9Y2R5 130 aaKnown RBP18.5■□□□□ 0.55
COMMD4-222ENST00000568034 FAM170BA6NMN3 283 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 H3BRJ5 948 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 DCLK1O15075 740 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 FGF10O15520 208 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 FTCDO95954 541 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 TNNT1P13805 278 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 ERCC2P18074 760 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 MZF1P28698 734 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 CTNNA1P35221 906 aaKnown RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 KRT81Q14533 505 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 SETD3Q86TU7 594 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 APCDD1Q8J025 514 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 FLCNQ8NFG4 579 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 CLDN23Q96B33 292 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF670Q9BS34 389 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 ETNK2Q9NVF9 386 aa18.49■□□□□ 0.55
COMMD4-222ENST00000568034 KIAA1522Q9P206 1035 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 MFHAS1Q9Y4C4 1052 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms