RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TBC1D31Q96DN5 1066 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 C1orf74Q96LT6 269 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 DCLK3Q9C098 648 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ARHGEF4Q9NR80 690 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 RBM12Q9NTZ6 932 aaKnown RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 LSM7Q9UK45 103 aaKnown RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ARHGAP26Q9UNA1 814 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 DUSP12Q9UNI6 340 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 SH3BP1Q9Y3L3 701 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 FANCMQ8IYD8 2048 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 DOCK8Q8NF50 2099 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 GOLGA6L7A0A1B0GV03 622 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 F5H5T6 163 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 APOC4-APOC2K7ER74 178 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 LEFTY2O00292 366 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 PHF2O75151 1096 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 LATS1O95835 1130 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 APOC2P02655 101 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 KLKB1P03952 638 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 TACR2P21452 398 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 TGM2P21980 687 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 EPHB2P29323 1055 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 HCAR3P49019 387 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 MLLT6P55198 1093 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 ZXDBP98169 803 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 AUHQ13825 339 aaKnown RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 SLC9A4Q6AI14 798 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 NADSYN1Q6IA69 706 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 C1orf228Q6PIY5 440 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 LRRC31Q6UY01 552 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 GET4Q7L5D6 327 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 DDX42Q86XP3 938 aaKnown RBP eCLIP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 KLHL7Q8IXQ5 586 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 TTC16Q8NEE8 873 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 C1orf54Q8WWF1 131 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 ATG4AQ8WYN0 398 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 WBP2Q969T9 261 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 SMG9Q9H0W8 520 aaKnown RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 PRDM16Q9HAZ2 1276 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 STIM2Q9P246 746 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 CFAP97Q9P2B7 532 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 AGO1Q9UL18 857 aaKnown RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 VANGL2Q9ULK5 521 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 NEU3Q9UQ49 428 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 R3HDM2Q9Y2K5 976 aaKnown RBP11.42□□□□□ -0.58
SF3B3-205ENST00000564899 FRYQ5TBA9 3013 aa11.42□□□□□ -0.58
SF3B3-205ENST00000564899 DCLK1O15075 740 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 FGF10O15520 208 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 LMNAP02545 664 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 DCNP07585 359 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 GLULP15104 373 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 PECAM1P16284 738 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ERCC2P18074 760 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 HOXC13P31276 330 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 TDGQ13569 410 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ATAT1Q5SQI0 421 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 TEX35Q5T0J7 233 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 NCBP2-AS2Q69YL0 99 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 FBXL22Q6P050 247 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 Q6ZNB5 142 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 NPAS3Q8IXF0 933 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ZNF683Q8IZ20 524 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 LGI2Q8N0V4 545 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 C12orf50Q8NA57 414 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ACTL9Q8TC94 416 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 SH3RF2Q8TEC5 729 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 USP13Q92995 863 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 MAGOHBQ96A72 148 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ZSWIM3Q96MP5 696 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 RPRD1AQ96P16 312 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 KRT12Q99456 494 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 PRMT1Q99873 361 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 FAM118BQ9BPY3 351 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 FRMD8P1Q9BZ68 369 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
SF3B3-205ENST00000564899 CATSPERBQ9H7T0 1116 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ETNK2Q9NVF9 386 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 FBXL21Q9UKT6 434 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 CA14Q9ULX7 337 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 ZNF510Q9Y2H8 683 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 MFHAS1Q9Y4C4 1052 aa11.41□□□□□ -0.58
SF3B3-205ENST00000564899 IGLV3-10A0A075B6K4 115 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 SCAMP3O14828 347 aaKnown RBP11.4□□□□□ -0.58
SF3B3-205ENST00000564899 MCF2LO15068 1137 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 MFSD11O43934 449 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 GREM1O60565 184 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 SLC6A4P31645 630 aa11.4□□□□□ -0.58
SF3B3-205ENST00000564899 CHRNA3P32297 505 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms